RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SULF2Q8IWU5 870 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 CACTIN-AS1Q8N1I8 211 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 TXLNBQ8N3L3 684 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 DDX54Q8TDD1 881 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 DDX1Q92499 740 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 WNT2BQ93097 391 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 TRIM8Q9BZR9 551 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 CHMP4BQ9H444 224 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 DEF6Q9H4E7 631 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 PCIF1Q9H4Z3 704 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 CXorf56Q9H5V9 222 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 PHAXQ9H814 394 aaKnown RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 KMT5AQ9NQR1 393 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 ANLNQ9NQW6 1124 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 CWC25Q9NXE8 425 aaPredicted RBP4.1□□□□□ -1.75
XRN1-202ENST00000392981 BTG4Q9NY30 223 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 SRPK3Q9UPE1 567 aa4.1□□□□□ -1.75
XRN1-202ENST00000392981 FAM163BP0C2L3 166 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 ACPPP15309 386 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 YY1P25490 414 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TARSP26639 723 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 DNAJC21Q5F1R6 531 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 GPR158Q5T848 1215 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 PODNQ7Z5L7 613 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 CISD2Q8N5K1 135 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 FAM160A2Q8N612 972 aaPredicted RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 TRIML1Q8N9V2 468 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 GJA10Q969M2 543 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 GAS2L1Q99501 681 aaPredicted RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 SLC12A5Q9H2X9 1139 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 RRP7AQ9Y3A4 280 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 CORINQ9Y5Q5 1042 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TECP42680 631 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 DGKGP49619 791 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 SH3BP2P78314 561 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TNFAIP2Q03169 654 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 KIAA2012Q0VF49 1180 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 KRT32Q14532 448 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 FNDC3BQ53EP0 1204 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 BRF1Q92994 677 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 XAGE2Q96GT9 111 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 ESYT1Q9BSJ8 1104 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 ADAM19Q9H013 955 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 C1orf112Q9NSG2 853 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 KCNG1Q9UIX4 513 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 ODF2LQ9ULJ1 636 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TMCC3Q9ULS5 477 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 SPEF1Q9Y4P9 236 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 CDK2AP1O14519 115 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 ITGA6P23229 1130 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 POLR2BP30876 1174 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 KIF5BP33176 963 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TNNT3P45378 269 aaPredicted RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 POLR2FP61218 127 aaKnown RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 TRIP4Q15650 581 aaPredicted RBP4.09□□□□□ -1.75
XRN1-202ENST00000392981 BTLAQ7Z6A9 289 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 NLRP13Q86W25 1043 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 TCP11L2Q8N4U5 519 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 SH2D3CQ8N5H7 860 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 FAM156AQ8NDB6 213 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 RHOVQ96L33 236 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 YME1L1Q96TA2 773 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 CD248Q9HCU0 757 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 DNAJC28Q9NX36 388 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 SIK3Q9Y2K2 1263 aa4.09□□□□□ -1.75
XRN1-202ENST00000392981 PPM1BO75688 479 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 MX2P20592 715 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 NRLP54845 237 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 PDE4BQ07343 736 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 WASHC5Q12768 1159 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 HYAL2Q12891 473 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 TEAD4Q15561 434 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 C1QTNF12Q5T7M4 302 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 NXNQ6DKJ4 435 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 PGBD2Q6P3X8 592 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 AGMOQ6ZNB7 445 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 CFAP53Q96M91 514 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 KATNAL1Q9BW62 490 aa4.09□□□□□ -1.76
XRN1-202ENST00000392981 ABHD14A-ACY1A0A1B0GW23 586 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 B4E1Z4 1266 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ZBED4O75132 1171 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 KRT15P19012 456 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ELF1P32519 619 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ABCD1P33897 745 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 HNRNPUQ00839 825 aaKnown RBP eCLIP4.08□□□□□ -1.76
XRN1-202ENST00000392981 SMC1AQ14683 1233 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 BBS9Q3SYG4 887 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 LRCH2Q5VUJ6 765 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 CCDC129Q6ZRS4 1044 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 ANKRD13DQ6ZTN6 518 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 FGD2Q7Z6J4 655 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 SYTL1Q8IYJ3 562 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 DZANK1Q9NVP4 752 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 CPA4Q9UI42 421 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 PNMA8BQ9ULN7 279 aaPredicted RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 KCNQ2O43526 872 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 S1PR4O95977 384 aa4.08□□□□□ -1.76
XRN1-202ENST00000392981 EIF2AK2P19525 551 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 CLNS1AP54105 237 aaKnown RBP4.08□□□□□ -1.76
XRN1-202ENST00000392981 LDHAL6AQ6ZMR3 332 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms