RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 C21orf62-AS1Q17RA5 79 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 YOD1Q5VVQ6 348 aaPredicted RBP4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 WWC2Q6AWC2 1192 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 LRRTM3Q86VH5 581 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 THNSL2Q86YJ6 484 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 BTN2A2Q8WVV5 523 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 CLUHP3Q96NS8 147 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 CEP89Q96ST8 783 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 SSBP4Q9BWG4 385 aaPredicted RBP4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 DDX56Q9NY93 547 aaKnown RBP4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 SFMBT1Q9UHJ3 866 aa4.09□□□□□ -1.75
TRAJ40-201ENST00000390497 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 SSU72P8A0A1W2PR75 194 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 C2orf71A6NGG8 1288 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 FAM155AB1AL88 458 aaPredicted RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 IRS4O14654 1257 aaPredicted RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 VAMP4O75379 141 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 LEFTY1O75610 366 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 PRAMEF1O95521 474 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 SRFP11831 508 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 PMLP29590 882 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 BMP8BP34820 402 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 GATA4P43694 442 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 TESK1Q15569 626 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 SLC35F1Q5T1Q4 408 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 ACBD5Q5T8D3 534 aaPredicted RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 EEF1DP3Q658K8 133 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 E4F1Q66K89 784 aaPredicted RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 RNF43Q68DV7 783 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 STYK1Q6J9G0 422 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 ARHGAP27Q6ZUM4 889 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 TMC3Q7Z5M5 1100 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 ANKLE2Q86XL3 938 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 MFSD4AQ8N468 514 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 LINC00116Q8NCU8 138 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 GSTCDQ8NEC7 633 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 COPS5Q92905 334 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 Q96M66 194 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 HEXIM2Q96MH2 286 aaKnown RBP4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 HOMER2Q9NSB8 354 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 SNX11Q9Y5W9 270 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 ST14Q9Y5Y6 855 aa4.08□□□□□ -1.76
TRAJ40-201ENST00000390497 HMX2A2RU54 273 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 GSG1L2A8MUP6 293 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 AURKAO14965 403 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 TBX1O43435 398 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 C6orf222P0C671 652 aaPredicted RBP4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 VAV1P15498 845 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 IGFALSP35858 605 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 ECI1P42126 302 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 SEPHS1P49903 392 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 NEK4P51957 841 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 PCBP3P57721 371 aaKnown RBP4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 TNK2Q07912 1038 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 SNW1Q13573 536 aaKnown RBP4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 CNNM4Q6P4Q7 775 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 PRR23CQ6ZRP0 262 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 THAP5Q7Z6K1 395 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 FERMT3Q86UX7 667 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 KIF18BQ86Y91 864 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 TMEM145Q8NBT3 493 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 SLC7A14Q8TBB6 771 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 GATA6Q92908 595 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 TP53INP1Q96A56 240 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 ZDHHC15Q96MV8 337 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 HDAC8Q9BY41 377 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 DUSP15Q9H1R2 295 aaPredicted RBP4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 C7orf69Q9H7B7 122 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 TRIM39Q9HCM9 518 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 GPR27Q9NS67 375 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 ATG3Q9NT62 314 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 NDOR1Q9UHB4 597 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 GPR55Q9Y2T6 319 aaPredicted RBP4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 NPFFR2Q9Y5X5 522 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 BACE2Q9Y5Z0 518 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 CAPN6Q9Y6Q1 641 aa4.07□□□□□ -1.76
TRAJ40-201ENST00000390497 CNTNAP4Q9C0A0 1308 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 H0Y8X5 98 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 GSTA4O15217 222 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 OPA1O60313 960 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 BRINP1O60477 761 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 TBC1D8O95759 1140 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 PDGFRBP09619 1106 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 SDSP20132 328 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 ADMP35318 185 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 EXOSC10Q01780 885 aaKnown RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 SCRN1Q12765 414 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 DHCR24Q15392 516 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 DPY19L1Q2PZI1 675 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 RCSD1Q6JBY9 416 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 RNF111Q6ZNA4 994 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 USP53Q70EK8 1073 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 RNF180Q86T96 592 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 DDX53Q86TM3 631 aaKnown RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 CD163Q86VB7 1156 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 TSPYL5Q86VY4 417 aaPredicted RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 KSR1Q8IVT5 923 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 RPUSD2Q8IZ73 545 aaKnown RBP4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 IFNL3Q8IZI9 196 aa4.06□□□□□ -1.76
TRAJ40-201ENST00000390497 USHBP1Q8N6Y0 703 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms