RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZSCAN22P10073 491 aaPredicted RBP5.78□□□□□ -1.48
TRAV40-201ENST00000390467 GJA8P48165 433 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 COL9A2Q14055 689 aaPredicted RBP5.78□□□□□ -1.48
TRAV40-201ENST00000390467 FBLN7Q53RD9 439 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 FIBCD1Q8N539 461 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 JMJD8Q96S16 334 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 PCDHB10Q9UN67 800 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 FHOD1Q9Y613 1164 aa5.78□□□□□ -1.48
TRAV40-201ENST00000390467 GSTM1P09488 218 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 PNLIPP16233 465 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 CD247P20963 164 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 GIPRP48546 466 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 EIF6P56537 245 aaKnown RBP5.77□□□□□ -1.49
TRAV40-201ENST00000390467 ERVFRD-1P60508 538 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 RGS22Q8NE09 1264 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 SHDQ96IW2 340 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 NOL6Q9H6R4 1146 aaKnown RBP5.77□□□□□ -1.49
TRAV40-201ENST00000390467 IMPACTQ9P2X3 320 aa5.77□□□□□ -1.49
TRAV40-201ENST00000390467 MBD1Q9UIS9 605 aaPredicted RBP5.77□□□□□ -1.49
TRAV40-201ENST00000390467 A0A1W2PQH9 124 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 MSL3P1P0C860 447 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 IFNGR1P15260 489 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 PRKCAP17252 672 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 ENDOUP21128 410 aaKnown RBP5.76□□□□□ -1.49
TRAV40-201ENST00000390467 VIPR1P32241 457 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 NASPP49321 788 aaPredicted RBP5.76□□□□□ -1.49
TRAV40-201ENST00000390467 EPHB3P54753 998 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 SSPNQ14714 243 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 NOL9Q5SY16 702 aaKnown RBP5.76□□□□□ -1.49
TRAV40-201ENST00000390467 GALNT18Q6P9A2 607 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 FAM169BQ8N8A8 192 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 ZSCAN18Q8TBC5 510 aaPredicted RBP5.76□□□□□ -1.49
TRAV40-201ENST00000390467 KLHL6Q8WZ60 621 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 ZDHHC15Q96MV8 337 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 HAUS7Q99871 368 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 SRRTQ9BXP5 876 aaKnown RBP5.76□□□□□ -1.49
TRAV40-201ENST00000390467 ACBD3Q9H3P7 528 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 TNFRSF12AQ9NP84 129 aa5.76□□□□□ -1.49
TRAV40-201ENST00000390467 A0A1W2PQ45 241 aaPredicted RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 A0A1W2PQY0 241 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 WTIPA6NIX2 430 aaPredicted RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 FGF10O15520 208 aaPredicted RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 NUAK1O60285 661 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 YBX1P67809 324 aaKnown RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 CWF19L1Q69YN2 538 aaKnown RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 CIAPIN1Q6FI81 312 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 C19orf47Q8N9M1 422 aaKnown RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 NUP43Q8NFH3 380 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 ADCY4Q8NFM4 1077 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 SPATA32Q96LK8 384 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 FCRL3Q96P31 734 aaPredicted RBP5.75□□□□□ -1.49
TRAV40-201ENST00000390467 CRBNQ96SW2 442 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 KLHL25Q9H0H3 589 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 IRF2BPLQ9H1B7 796 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 ACSL6Q9UKU0 697 aa5.75□□□□□ -1.49
TRAV40-201ENST00000390467 HRKO00198 91 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 EPHX1P07099 455 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 CD3EP07766 207 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 ITGA4P13612 1032 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 SRSF3P84103 164 aaKnown RBP5.74□□□□□ -1.49
TRAV40-201ENST00000390467 PPP2R5DQ14738 602 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 TMEM132EQ6IEE7 984 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 NAT16Q8N8M0 369 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 MCMBPQ9BTE3 642 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 PHAXQ9H814 394 aaKnown RBP5.74□□□□□ -1.49
TRAV40-201ENST00000390467 CNTD2Q9H8S5 307 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 KLHL14Q9P2G3 628 aa5.74□□□□□ -1.49
TRAV40-201ENST00000390467 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 NUDT19A8MXV4 375 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 CDR1P51861 262 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 CYP4F8P98187 520 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 MVKQ03426 396 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 AMIGO3Q86WK7 504 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 SIAH1Q8IUQ4 282 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 FGD4Q96M96 766 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 TGIF2Q9GZN2 237 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 WHRNQ9P202 907 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 SUSD2Q9UGT4 822 aa5.73□□□□□ -1.49
TRAV40-201ENST00000390467 PI3P19957 117 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 SLC7A5Q01650 507 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 LAPTM5Q13571 262 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 RPTNQ6XPR3 784 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 OR6P1Q8NGX9 317 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 PANK1Q8TE04 598 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 PTCHD1Q96NR3 888 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 CNOT6Q9ULM6 557 aaKnown RBP5.72□□□□□ -1.49
TRAV40-201ENST00000390467 SF3B6Q9Y3B4 125 aaKnown RBP5.72□□□□□ -1.49
TRAV40-201ENST00000390467 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 SLC12A7Q9Y666 1083 aa5.72□□□□□ -1.49
TRAV40-201ENST00000390467 A0A087WZG4 1122 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 STXBP3O00186 592 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 IRS4O14654 1257 aaPredicted RBP5.71□□□□□ -1.5
TRAV40-201ENST00000390467 MPOP05164 745 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 ARL4AP40617 200 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 RAB3GAP1Q15042 981 aa5.71□□□□□ -1.5
TRAV40-201ENST00000390467 TCEAL1Q15170 157 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms