RNA–Protein interactions for RNA: ENST00000390396.1

TRBV23-1-201, Transcript of T cell receptor beta variable 23-1 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRBV23-1, Length 347 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1-201ENST00000390396 CD99L2Q8TCZ2 262 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 SMCR8Q8TEV9 937 aaPredicted RBP6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 PIBF1Q8WXW3 757 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 KIFC2Q96AC6 838 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 JAKMIP1Q96N16 626 aaKnown RBP6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 ZSCAN10Q96SZ4 725 aaPredicted RBP6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 MYL10Q9BUA6 226 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 ARHGAP39Q9C0H5 1083 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 VCPKMTQ9H867 229 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 GOPCQ9HD26 462 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 GINM1Q9NU53 330 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 NYAP2Q9P242 653 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 HCSTQ9UBK5 93 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 SNX14Q9Y5W7 946 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 TNKSO95271 1327 aa6.96□□□□□ -1.3
TRBV23-1-201ENST00000390396 ATAD5Q96QE3 1844 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L15C9J2P7 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L13C9JLJ4 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 TMEM232C9JQI7 657 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L11C9JVI0 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L18D6R9N7 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L22D6RA61 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L17D6RBQ6 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L19D6RCP7 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L20D6RJB6 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 GPR25O00155 361 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 CA12O43570 354 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 ZKSCAN1P17029 563 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 HSPA4P34932 840 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 SLC1A4P43007 532 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 CTCFP49711 727 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP14P54578 494 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 CAP1Q01518 475 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 USP17L24Q0WX57 530 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 WTAPQ15007 396 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 Q3C1V9 767 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 IFIT1BQ5T764 474 aaKnown RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 RCSD1Q6JBY9 416 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 CATSPERGQ6ZRH7 1159 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 IQCA1Q86XH1 822 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 MB21D2Q8IYB1 491 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 CPXCR1Q8N123 301 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 PROCA1Q8NCQ7 364 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 NUP133Q8WUM0 1156 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 ZNF296Q8WUU4 475 aaPredicted RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 HLA-CQ95604 372 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 NEK1Q96PY6 1258 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 PARK7Q99497 189 aaKnown RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 TBC1D2Q9BYX2 928 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 UPF3BQ9BZI7 483 aaKnown RBP6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 UBA5Q9GZZ9 404 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 KAT14Q9H8E8 782 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 VAT1LQ9HCJ6 419 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 TXNRD2Q9NNW7 524 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 LAMB1P07942 1786 aa6.95□□□□□ -1.3
TRBV23-1-201ENST00000390396 ERICH2A1L162 156 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 FKTNO75072 461 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 PPFIA3O75145 1194 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 FMNL1O95466 1100 aaPredicted RBP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 ALDH1A1P00352 501 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 MYCP01106 439 aaPredicted RBP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 BMP3P12645 472 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CASTP20810 708 aaKnown RBP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 MCM5P33992 734 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 HERVK_113P62684 666 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 FGD1P98174 961 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 FUT2Q10981 343 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 PABPC4Q13310 644 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CCDC174Q6PII3 467 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CCDC82Q8N4S0 544 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 SPIRE2Q8WWL2 714 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 MKL1Q969V6 931 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 BTBD7Q9P203 1132 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CTDP1Q9Y5B0 961 aaPredicted RBP6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 PHIPQ8WWQ0 1821 aa6.94□□□□□ -1.3
TRBV23-1-201ENST00000390396 CEP350Q5VT06 3117 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 CCDC69A6NI79 296 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 WDR46O15213 610 aaKnown RBP6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 DHX16O60231 1041 aaKnown RBP6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 TLR2O60603 784 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 CNMDO75829 334 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 PCP11498 1178 aaKnown RBP6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 CTGFP29279 349 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 PSMC4P43686 418 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 SP3Q02447 781 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 APOBRQ0VD83 1088 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 COG2Q14746 738 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 SEC23AQ15436 765 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 COL13A1Q5TAT6 717 aaPredicted RBP6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 BLOC1S2Q6QNY1 142 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 C17orf99Q6UX52 265 aa6.93□□□□□ -1.3
TRBV23-1-201ENST00000390396 Q6ZUG5 572 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms