RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 KRT15P19012 456 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CTNNA1P35221 906 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 TRIP13Q15645 432 aaPredicted RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 WDR44Q5JSH3 913 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 EEPD1Q7L9B9 569 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TBC1D10CQ8IV04 446 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TMEM87AQ8NBN3 555 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 BCAS4Q8TDM0 211 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TBC1D31Q96DN5 1066 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 MTUS1Q9ULD2 1270 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CAPN7Q9Y6W3 813 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 PPIP5K2O43314 1243 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 PDE6BP35913 854 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 SESN3P58005 492 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ADAM9Q13443 819 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CFAP221Q4G0U5 840 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 KRT25Q7Z3Z0 450 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ARHGEF25Q86VW2 580 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ARHGEF2Q92974 986 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 NSRP1Q9H0G5 558 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 WDR70Q9NW82 654 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 MAP3K15Q6ZN16 1313 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 IGSF1Q8N6C5 1336 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 OR52Z1P0C646 297 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ADD2P35612 726 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 GBP6Q6ZN66 633 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 MYOCDQ8IZQ8 938 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 PIGBQ92521 554 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 HPS3Q969F9 1004 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 OSBPL3Q9H4L5 887 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 FAM204AQ9H8W3 233 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TXNDC16Q9P2K2 825 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 APBA3O96018 575 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 XRCC5P13010 732 aaKnown RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 IGBP1P78318 339 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ZKSCAN8Q15776 578 aaPredicted RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 ANKFY1Q9P2R3 1169 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 PCDHA1Q9Y5I3 950 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 NEDD4P46934 1319 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ZBTB22O15209 634 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CALUO43852 315 aaPredicted RBP5.51□□□□□ -1.53
LTN1-202ENST00000389194 SAT1P21673 171 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 CLCN6P51797 869 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 MESDQ14696 234 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 SPATA1Q5VX52 437 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 HAUS3Q68CZ6 603 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TRIM68Q6AZZ1 485 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 SCYL2Q6P3W7 929 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TBCKQ8TEA7 893 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ZNF653Q96CK0 615 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 AP1M1Q9BXS5 423 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 ANO3Q9BYT9 981 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 NKIRAS1Q9NYS0 192 aa5.51□□□□□ -1.53
LTN1-202ENST00000389194 TTC37Q6PGP7 1564 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 EIF4E1BA6NMX2 242 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 CYP27B1O15528 508 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 PCCAP05165 728 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 ATXN8OSP0DMR3 200 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 SSTR3P32745 418 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 TRPC3Q13507 836 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 MTF1Q14872 753 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 GEN1Q17RS7 908 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 SUSD4Q5VX71 490 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 INTS8Q75QN2 995 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 NEK8Q86SG6 692 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 FAM133AQ8N9E0 248 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 RNF169Q8NCN4 708 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 TDRD7Q8NHU6 1098 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 VPS37BQ9H9H4 285 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 TBK1Q9UHD2 729 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 USP21Q9UK80 565 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ATP2A1O14983 1001 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 PRDX5P30044 214 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 MAN1A1P33908 653 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CUL4BQ13620 913 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 NLRP10Q86W26 655 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CTAGE3PQ8IX95 158 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 GPR161Q8N6U8 529 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 MRFAP1L1Q96HT8 127 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ZNF668Q96K58 619 aaPredicted RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 TSNARE1Q96NA8 513 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 SH2D3AQ9BRG2 576 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 PARD6BQ9BYG5 372 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.5□□□□□ -1.53
LTN1-202ENST00000389194 HYOU1Q9Y4L1 999 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CEP83Q9Y592 693 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 MED23Q9ULK4 1368 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 ZNF804BA4D1E1 1349 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 NOP56O00567 594 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 TRIM37O94972 964 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 RPSAP08865 295 aaKnown RBP5.5□□□□□ -1.53
LTN1-202ENST00000389194 TMOD1P28289 359 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 CDC27P30260 824 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 USP37Q86T82 979 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 HDAC6Q9UBN7 1215 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 FAM205CA6NFA0 338 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 UBE2Q2LH0YL09 131 aa5.5□□□□□ -1.53
LTN1-202ENST00000389194 K7ENM7 598 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 207.1 ms