RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PPP1R12CQ9BZL4 782 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 PLEKHA4Q9H4M7 779 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 C1orf112Q9NSG2 853 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 TESPA1A2RU30 521 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-202ENST00000380518 CYP21A2P08686 494 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 RNF26Q9BY78 433 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-202ENST00000380518 CUEDC2Q9H467 287 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 GREM2Q9H772 168 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 ST7Q9NRC1 585 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 RASSF2P50749 326 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 COPB1P53618 953 aaKnown RBP17.63■□□□□ 0.41
COL2A1-202ENST00000380518 ZSCAN26Q16670 478 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 APOA5Q6Q788 366 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 BTDP43251 543 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 PPARDQ03181 441 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
COL2A1-202ENST00000380518 CTAGE3PQ8IX95 158 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 RSAD2Q8WXG1 361 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 POLR3EQ9NVU0 708 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 RAB20Q9NX57 234 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 PNMA2Q9UL42 364 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 TACC3Q9Y6A5 838 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 SPATA31E1Q6ZUB1 1445 aa17.63■□□□□ 0.41
COL2A1-202ENST00000380518 GOLGA8KD6RF30 607 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 FOSP01100 380 aaPredicted RBP17.62■□□□□ 0.41
COL2A1-202ENST00000380518 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL2A1-202ENST00000380518 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 BUB1O43683 1085 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 LIG4P49917 911 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 ICA1Q05084 483 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 XKR9Q5GH70 373 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 GAS2L3Q86XJ1 694 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 ANKRD42Q8N9B4 389 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 TSC1Q92574 1164 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 K7ENM7 598 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 LAD1O00515 517 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 TROVE2P10155 538 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL2A1-202ENST00000380518 PRKG1Q13976 671 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 ZBTB8OSQ8IWT0 167 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 AS3MTQ9HBK9 375 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 HAUS2Q9NVX0 235 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 ALAS1P13196 640 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 GNGT1P63211 74 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
COL2A1-202ENST00000380518 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 M0QZ92 97 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 SLC12A2P55011 1212 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 HADHQ16836 314 aaKnown RBP17.61■□□□□ 0.41
COL2A1-202ENST00000380518 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 PALM2Q8IXS6 379 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 MED4Q9NPJ6 270 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
COL2A1-202ENST00000380518 SEMA3EO15041 775 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 ZWINTO95229 277 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 ADCY8P40145 1251 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
COL2A1-202ENST00000380518 TEKT3Q9BXF9 490 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 SARNPP82979 210 aaKnown RBP17.61■□□□□ 0.41
COL2A1-202ENST00000380518 CUL4AQ13619 759 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 AOC3Q16853 763 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 SLFN13Q68D06 897 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 PLA2G4DQ86XP0 818 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 MCF2L2Q86YR7 1114 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 MGARPQ8TDB4 240 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
COL2A1-202ENST00000380518 VCXQ9H320 206 aa17.61■□□□□ 0.41
COL2A1-202ENST00000380518 LTKP29376 864 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 CDC25BP30305 580 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 ADORA1P30542 326 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PHBP35232 272 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PDE6CP51160 858 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
COL2A1-202ENST00000380518 NACA2Q9H009 215 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 IKBKBO14920 756 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 TRIM37O94972 964 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 KRT12Q99456 494 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 TUBGCP2Q9BSJ2 902 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 NUF2Q9BZD4 464 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 YARSP54577 528 aaKnown RBP17.6■□□□□ 0.41
COL2A1-202ENST00000380518 SEPT6Q14141 434 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PSMD6Q15008 389 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 MLXIPQ9HAP2 919 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 CLNS1AP54105 237 aaKnown RBP17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PROSER3Q2NL68 480 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 PHLDB2Q86SQ0 1253 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 RABGGTAQ92696 567 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 CHAMP1Q96JM3 812 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 KLHL14Q9P2G3 628 aa17.6■□□□□ 0.41
COL2A1-202ENST00000380518 CCDC38Q502W7 563 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 PPM1KQ8N3J5 372 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 RILPQ96NA2 401 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
COL2A1-202ENST00000380518 CDC23Q9UJX2 597 aa17.59■□□□□ 0.41
COL2A1-202ENST00000380518 ZNF804BA4D1E1 1349 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms