RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 GPAA1O43292 621 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 GCNAQ96QF7 691 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 VGLL3A8MV65 326 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 DEXIO95424 95 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 YWHAHQ04917 246 aaPredicted RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 TTC25Q96NG3 672 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 AMFRQ9UKV5 643 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 LMNB1P20700 586 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 NONOQ15233 471 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD3-203ENST00000380358 CCDC138Q96M89 665 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 INO80B-WBP1J3KQ70 363 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CHD3-203ENST00000380358 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 AS3MTQ9HBK9 375 aa13.6□□□□□ -0.23
CHD3-203ENST00000380358 PPHLN1Q8NEY8 458 aaKnown RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 AFF4Q9UHB7 1163 aaKnown RBP13.6□□□□□ -0.23
CHD3-203ENST00000380358 KRIT1O00522 736 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 RWDD4Q6NW29 188 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 RAB44Q7Z6P3 723 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 NEUROG2Q9H2A3 272 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 FBXL5Q9UKA1 691 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 POLA1P09884 1462 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 DDAH1O94760 285 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 RASSF2P50749 326 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 DAB2P98082 770 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 BFSP1Q12934 665 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ARMCX5Q6P1M9 558 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 CFLARO15519 480 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 RNF8O76064 485 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 CTNNA1P35221 906 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 PDE6CP51160 858 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ELF2Q15723 593 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 HS1BP3Q53T59 392 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 BMP2KLQ5H9B9 411 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 RINT1Q6NUQ1 792 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 SDR42E1Q8WUS8 393 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 PCIF1Q9H4Z3 704 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 NFKBIL1Q9UBC1 381 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 ASPHQ12797 758 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 DMP1Q13316 513 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 FAM186BQ8IYM0 893 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 M0R2C6 588 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 RPSAP08865 295 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 PHBP35232 272 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 HADHAP40939 763 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 PPFIA4O75335 1185 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 CDO1Q16878 200 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 BTN2A2Q8WVV5 523 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 ABTB1Q969K4 478 aaPredicted RBP13.59□□□□□ -0.23
CHD3-203ENST00000380358 RIPOR2Q9Y4F9 1068 aa13.59□□□□□ -0.23
CHD3-203ENST00000380358 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.23
CHD3-203ENST00000380358 MYL1P05976 194 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 MYL3P08590 195 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 BAG6P46379 1132 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 SNAP25P60880 206 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 FANCCQ00597 558 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 ANO1Q5XXA6 986 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 DIS3L2Q8IYB7 885 aaKnown RBP13.58□□□□□ -0.23
CHD3-203ENST00000380358 PANK4Q9NVE7 773 aa13.58□□□□□ -0.23
CHD3-203ENST00000380358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.23
CHD3-203ENST00000380358 ARHGDIAP52565 204 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
CHD3-203ENST00000380358 YWHAEP62258 255 aaKnown RBP13.58□□□□□ -0.24
CHD3-203ENST00000380358 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.58□□□□□ -0.24
CHD3-203ENST00000380358 PLCH2O75038 1416 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 ACCSLQ4AC99 568 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 SNX19Q92543 992 aa13.58□□□□□ -0.24
CHD3-203ENST00000380358 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
CHD3-203ENST00000380358 CLTAP09496 248 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 IFNAR2P48551 515 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 HAUS1Q96CS2 278 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
CHD3-203ENST00000380358 SMAD5Q99717 465 aaKnown RBP13.57□□□□□ -0.24
CHD3-203ENST00000380358 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms