RNA–Protein interactions for RNA: ENST00000380142.4

CDKN2B-202, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

TSL 1 (best) BASIC

Gene CDKN2B, Length 859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-202ENST00000380142 RASIP1Q5U651 963 aa27.27■■□□□ 1.96
CDKN2B-202ENST00000380142 ARMCX2Q7L311 632 aa27.27■■□□□ 1.96
CDKN2B-202ENST00000380142 LRRC47Q8N1G4 583 aaKnown RBP27.27■■□□□ 1.96
CDKN2B-202ENST00000380142 GPAA1O43292 621 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 ZBED4O75132 1171 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 FAM126BQ8IXS8 530 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 GLT1D1Q96MS3 346 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 ABHD16BQ9H3Z7 469 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 ZNF576Q9H609 170 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 MTMR4Q9NYA4 1195 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 CHD9Q3L8U1 2897 aa27.26■■□□□ 1.95
CDKN2B-202ENST00000380142 ASTN1O14525 1302 aa27.25■■□□□ 1.95
CDKN2B-202ENST00000380142 CNTN2Q02246 1040 aa27.25■■□□□ 1.95
CDKN2B-202ENST00000380142 PRDM6Q9NQX0 595 aa27.25■■□□□ 1.95
CDKN2B-202ENST00000380142 FEM1BQ9UK73 627 aa27.25■■□□□ 1.95
CDKN2B-202ENST00000380142 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 ARVCFO00192 962 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 RNF113AO15541 343 aaKnown RBP27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 CSF2RAP15509 400 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 PTGS1P23219 599 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 NKX3-2P78367 333 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 CCDC144CPQ8IYA2 1237 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 ANKRD35Q8N283 1001 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 CHST13Q8NET6 341 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 TIFAQ96CG3 184 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 PBX4Q9BYU1 374 aa27.24■■□□□ 1.95
CDKN2B-202ENST00000380142 PLIN4Q96Q06 1357 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 ZNF536O15090 1300 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 ACRP10323 421 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 BEX3Q00994 111 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 FAM133AQ8N9E0 248 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 PCSK9Q8NBP7 692 aaKnown RBP27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 GMCL1P1Q8NEA9 526 aa27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 DDX49Q9Y6V7 483 aaKnown RBP27.23■■□□□ 1.95
CDKN2B-202ENST00000380142 MROH7Q68CQ1 1323 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 A0A0U1RQG5 324 aaPredicted RBP27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 CD4P01730 458 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 OAZ1P54368 228 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 GNASQ5JWF2 1037 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 PPP1R12CQ9BZL4 782 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 HOMER2Q9NSB8 354 aa27.22■■□□□ 1.95
CDKN2B-202ENST00000380142 SOWAHBA6NEL2 793 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 TTLL1O95922 423 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 TDO2P48775 406 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 PPIGQ13427 754 aaKnown RBP eCLIP27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 SLFN13Q68D06 897 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 ZNF365Q70YC5 407 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 IFNL3Q8IZI9 196 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 ZNF444Q8N0Y2 327 aaPredicted RBP27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 NEDD1Q8NHV4 660 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 SEC62Q99442 399 aaKnown RBP27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 FBXO40Q9UH90 709 aa27.21■■□□□ 1.95
CDKN2B-202ENST00000380142 VTI1AQ96AJ9 217 aa27.2■■□□□ 1.94
CDKN2B-202ENST00000380142 AGBL1Q96MI9 1066 aa27.2■■□□□ 1.94
CDKN2B-202ENST00000380142 A1CFQ9NQ94 594 aaKnown RBP27.2■■□□□ 1.94
CDKN2B-202ENST00000380142 SYNPO2Q9UMS6 1093 aa27.2■■□□□ 1.94
CDKN2B-202ENST00000380142 UMODL1Q5DID0 1318 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 PATL2C9JE40 543 aaKnown RBP27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 BMP3P12645 472 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 CYP2C18P33260 490 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 SLC43A3Q8NBI5 491 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 CHMP4BQ9H444 224 aaKnown RBP27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 DCTPP1Q9H773 170 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 RCAN3Q9UKA8 241 aa27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 GNEQ9Y223 722 aaKnown RBP27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 CTDP1Q9Y5B0 961 aaPredicted RBP27.19■■□□□ 1.94
CDKN2B-202ENST00000380142 GRIN2DO15399 1336 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 TMEM232C9JQI7 657 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 TMEM63BQ5T3F8 832 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 RASGRP2Q7LDG7 609 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 CHMP4CQ96CF2 233 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 SPC25Q9HBM1 224 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 CXXC1Q9P0U4 656 aaPredicted RBP27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 CHD7Q9P2D1 2997 aa27.18■■□□□ 1.94
CDKN2B-202ENST00000380142 GNAT2P19087 354 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 ADGRE1Q14246 886 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 CXCL17Q6UXB2 119 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 TMEM199Q8N511 208 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 PRDM12Q9H4Q4 367 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 ACAD9Q9H845 621 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 RNF146Q9NTX7 359 aa27.17■■□□□ 1.94
CDKN2B-202ENST00000380142 MUC3AQ02505 3323 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 FOXP2O15409 715 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 APPP05067 770 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 ZFYP08048 801 aaPredicted RBP27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 TFAP4Q01664 338 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 TNFAIP2Q03169 654 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 TJAP1Q5JTD0 557 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 SYMPKQ92797 1274 aaKnown RBP27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 PDGFCQ9NRA1 345 aa27.16■■□□□ 1.94
CDKN2B-202ENST00000380142 TSPY3P0CV98 308 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 TSPY8P0CW00 308 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 SNAP25P60880 206 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 CCDC129Q6ZRS4 1044 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 VWCEQ96DN2 955 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 IL23AQ9NPF7 189 aa27.15■■□□□ 1.94
CDKN2B-202ENST00000380142 SCN5AQ14524 2016 aa27.14■■□□□ 1.94
CDKN2B-202ENST00000380142 SMPD1P17405 629 aa27.14■■□□□ 1.94
CDKN2B-202ENST00000380142 STAT2P52630 851 aa27.14■■□□□ 1.94
CDKN2B-202ENST00000380142 MUM1L1Q5H9M0 696 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms