RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 BTBD18B2RXH4 712 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 GOLGA8KD6RF30 607 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 GNPATO15228 680 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 ADCY7P51828 1080 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 PPARAQ07869 468 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 STAMQ92783 540 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 DESI2Q9BSY9 194 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 SPTLC3Q9NUV7 552 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 DBNLQ9UJU6 430 aaKnown RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 CIAO1O76071 339 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 ZNF827Q17R98 1081 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 PEX26Q7Z412 305 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 C2CD5Q86YS7 1000 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 REXO1Q8N1G1 1221 aaKnown RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 PDLIM2Q96JY6 352 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 EYA3Q99504 573 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 RAB17Q9H0T7 212 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 FOXP1Q9H334 677 aaPredicted RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 C4BP0C0L5 1744 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 CCDC151A5D8V7 595 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 B4DLN1 442 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 PCCAP05165 728 aaPredicted RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 CALCRLQ16602 461 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 ZNF365Q70YC5 407 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 LINC00301Q8NCQ3 95 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 ZNF622Q969S3 477 aaKnown RBP eCLIP9.29□□□□□ -0.925e-6■■■□□ 17.1
VPS36-201ENST00000378060 MAGEF1Q9HAY2 307 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 ARPP21Q9UBL0 812 aaPredicted RBP9.29□□□□□ -0.92
VPS36-201ENST00000378060 DNM3Q9UQ16 869 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 CLIC4Q9Y696 253 aa9.29□□□□□ -0.92
VPS36-201ENST00000378060 MED23Q9ULK4 1368 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 TRAPPC10P48553 1259 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 ATP11AP98196 1134 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 NECTIN1Q15223 517 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 BLIDQ8IZY5 108 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 PDGFDQ9GZP0 370 aaPredicted RBP9.28□□□□□ -0.92
VPS36-201ENST00000378060 PARP2Q9UGN5 583 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 POLA2Q14181 598 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 HLFQ16534 295 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 LONRF3Q496Y0 759 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 ZBTB9Q96C00 473 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 BLZF1Q9H2G9 400 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
VPS36-201ENST00000378060 CCDC87Q9NVE4 849 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
VPS36-201ENST00000378060 CARMIL3Q8ND23 1372 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 ARFGEF2Q9Y6D5 1785 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 GJC1P36383 396 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
VPS36-201ENST00000378060 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 WDR78Q5VTH9 848 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 MCTP2Q6DN12 878 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 SARM1Q6SZW1 724 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 MAIP1Q8WWC4 291 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS36-201ENST00000378060 SMTNP53814 917 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 RNASE9P60153 205 aaKnown RBP9.28□□□□□ -0.92
VPS36-201ENST00000378060 TFAP4Q01664 338 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 INF2Q27J81 1249 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 DPCR1Q3MIW9 517 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 WDR44Q5JSH3 913 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 KLHL7Q8IXQ5 586 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 RETREG2Q8NC44 543 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 CCDC110Q8TBZ0 833 aa9.28□□□□□ -0.92
VPS36-201ENST00000378060 NDC80O14777 642 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 BCRP11274 1271 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 CTSWP56202 376 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 ENOX1Q8TC92 643 aaKnown RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 ZSCAN10Q96SZ4 725 aaPredicted RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 RNF26Q9BY78 433 aaPredicted RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 TUBGCP6Q96RT7 1819 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 MAST3O60307 1309 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 KDM3AQ9Y4C1 1321 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 RESTQ13127 1097 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 NAA25Q14CX7 972 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 C11orf57Q6ZUT1 292 aaPredicted RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 DYMQ7RTS9 669 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 CTTNBP2NLQ9P2B4 639 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 EXOC7Q9UPT5 735 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 TNKSO95271 1327 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 DKC1O60832 514 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS36-201ENST00000378060 DDAH1O94760 285 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 SCG2P13521 617 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 COPB1P53618 953 aaKnown RBP9.27□□□□□ -0.93
VPS36-201ENST00000378060 LIN9Q5TKA1 542 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 MYOCDQ8IZQ8 938 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 AATFQ9NY61 560 aaKnown RBP eCLIP9.27□□□□□ -0.93
VPS36-201ENST00000378060 TXNDC16Q9P2K2 825 aa9.27□□□□□ -0.93
VPS36-201ENST00000378060 USP17L12C9JPN9 530 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms