RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 GNA11P29992 359 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 PAK1Q13153 545 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 FCHSD1Q86WN1 690 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 NLGN1Q8N2Q7 840 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 RIOX1Q9H6W3 641 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 RMND1Q9NWS8 449 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 SUGT1Q9Y2Z0 365 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 LAD1O00515 517 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 STX10O60499 249 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 OR52Z1P0C646 297 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 CCT6AP40227 531 aaKnown RBP21.15■□□□□ 0.98
USP49-202ENST00000373010 PBX1P40424 430 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 PRPHP41219 470 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 PRCPP42785 496 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 TRIM65Q6PJ69 517 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 TOGARAM2Q6ZUX3 1019 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 IGSF22Q8N9C0 903 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 CPLX3Q8WVH0 158 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 CCSER1Q9C0I3 900 aa21.15■□□□□ 0.98
USP49-202ENST00000373010 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.98
USP49-202ENST00000373010 SLURP2P0DP57 97 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 ETF1P62495 437 aaKnown RBP21.14■□□□□ 0.97
USP49-202ENST00000373010 RBL2Q08999 1139 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 NEK8Q86SG6 692 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 COA7Q96BR5 231 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 GPCPD1Q9NPB8 672 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 DNAI1Q9UI46 699 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 COL11A2P13942 1736 aaPredicted RBP21.14■□□□□ 0.97
USP49-202ENST00000373010 NRXN2Q9P2S2 1712 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 IGKV6D-41A0A0C4DH26 115 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 AKR1B15C9JRZ8 316 aaPredicted RBP21.14■□□□□ 0.97
USP49-202ENST00000373010 KRT31Q15323 416 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 CDC42EP5Q6NZY7 148 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 TBCKQ8TEA7 893 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 SERPINB13Q9UIV8 391 aa21.14■□□□□ 0.97
USP49-202ENST00000373010 FILIP1LQ4L180 1135 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 KCNQ5Q9NR82 932 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 G3V3G9 751 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 ZSCAN12O43309 604 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 MMP10P09238 476 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 KMT5BQ4FZB7 885 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 PPP4R3BQ5MIZ7 849 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 DCAF8Q5TAQ9 597 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 CABP7Q86V35 215 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 CREBRFQ8IUR6 639 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 REXO1Q8N1G1 1221 aaKnown RBP21.13■□□□□ 0.97
USP49-202ENST00000373010 AKT1S1Q96B36 256 aa21.13■□□□□ 0.97
USP49-202ENST00000373010 FANCGO15287 622 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 KLRC4O43908 158 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 SLU7O95391 586 aaKnown RBP21.12■□□□□ 0.97
USP49-202ENST00000373010 PLCG1P19174 1290 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 SHMT1P34896 483 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 PPFIBP1Q86W92 1011 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 CCDC94Q9BW85 323 aaPredicted RBP21.12■□□□□ 0.97
USP49-202ENST00000373010 L2HGDHQ9H9P8 463 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 KBTBD4Q9NVX7 518 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 LIMA1Q9UHB6 759 aaKnown RBP21.12■□□□□ 0.97
USP49-202ENST00000373010 ALDH1B1P30837 517 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 MTF1Q14872 753 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 MSL1Q68DK7 614 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 DESI2Q9BSY9 194 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 VPS16Q9H269 839 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 DBNDD1Q9H9R9 158 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 TAB2Q9NYJ8 693 aa21.12■□□□□ 0.97
USP49-202ENST00000373010 TRIM49BA6NDI0 452 aa21.11■□□□□ 0.97
USP49-202ENST00000373010 TUBB4AP04350 444 aa21.11■□□□□ 0.97
USP49-202ENST00000373010 TECP42680 631 aa21.11■□□□□ 0.97
USP49-202ENST00000373010 NFIAQ12857 509 aa21.11■□□□□ 0.97
USP49-202ENST00000373010 ASPRV1Q53RT3 343 aa21.11■□□□□ 0.97
USP49-202ENST00000373010 APOBEC3HQ6NTF7 200 aaKnown RBP21.11■□□□□ 0.97
USP49-202ENST00000373010 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 POTEDQ86YR6 584 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 ADSSL1Q8N142 457 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 LRRN4CLQ8ND94 238 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 ERO1AQ96HE7 468 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 ESYT2A0FGR8 921 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 SOWAHDA6NJG2 315 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 KCNJ18B7U540 433 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 N4BP3O15049 544 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 TTLL1O95922 423 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 PDE6BP35913 854 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 KCNJ12Q14500 433 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 CCDC93Q567U6 631 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 TTBK2Q6IQ55 1244 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 ZFPM1Q8IX07 1006 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 ZNF622Q969S3 477 aaKnown RBP eCLIP21.1■□□□□ 0.97
USP49-202ENST00000373010 TEKT1Q969V4 418 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 PANX2Q96RD6 677 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 PCDHAC2Q9Y5I4 1007 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 PHLPP2Q6ZVD8 1323 aa21.1■□□□□ 0.97
USP49-202ENST00000373010 MPHOSPH10O00566 681 aaKnown RBP21.09■□□□□ 0.97
USP49-202ENST00000373010 CASP14P31944 242 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 COPB1P53618 953 aaKnown RBP21.09■□□□□ 0.97
USP49-202ENST00000373010 PMS1P54277 932 aaKnown RBP21.09■□□□□ 0.97
USP49-202ENST00000373010 ATP2B2Q01814 1243 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 TCP11X2Q5H9J9 407 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
USP49-202ENST00000373010 PARP3Q9Y6F1 533 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms