RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
COL5A1-202ENST00000371820 FCER1AP12319 257 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 MSNP26038 577 aaKnown RBP12.08□□□□□ -0.48
COL5A1-202ENST00000371820 MAGEA10P43363 369 aaPredicted RBP12.08□□□□□ -0.48
COL5A1-202ENST00000371820 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
COL5A1-202ENST00000371820 FAM184AQ8NB25 1140 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 RNF41Q9H4P4 317 aaPredicted RBP12.08□□□□□ -0.48
COL5A1-202ENST00000371820 TOMM22Q9NS69 142 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
COL5A1-202ENST00000371820 VWA5AO00534 786 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FOXP2O15409 715 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 RANBP6O60518 1105 aaKnown RBP12.07□□□□□ -0.48
COL5A1-202ENST00000371820 ZBED4O75132 1171 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 BRD1O95696 1058 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FGAP02671 866 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 ADORA2AP29274 412 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 HSPA4P34932 840 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 STAT3P40763 770 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 LRRC26Q2I0M4 334 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 OLFML2BQ68BL8 750 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 SLFN13Q68D06 897 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 LRSAM1Q6UWE0 723 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 LRRC47Q8N1G4 583 aaKnown RBP12.07□□□□□ -0.48
COL5A1-202ENST00000371820 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 TEX13BQ9BXU2 312 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 TM6SF1Q9BZW5 370 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
COL5A1-202ENST00000371820 DDX20Q9UHI6 824 aaKnown RBP12.07□□□□□ -0.48
COL5A1-202ENST00000371820 PRPF40AO75400 957 aaKnown RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 TPM2P07951 284 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 FGRP09769 529 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 BMP3P12645 472 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 CYBAP13498 195 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 CYP2C19P33261 490 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 STAT2P52630 851 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 OAZ1P54368 228 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 KCTD2Q14681 263 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 LRIT3Q3SXY7 679 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 ZNF589Q86UQ0 364 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 ZSCAN30Q86W11 494 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 TDHQ8IZJ6 230 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 CHURC1Q8WUH1 139 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 CHMP4CQ96CF2 233 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 MMP19Q99542 508 aa12.06□□□□□ -0.48
COL5A1-202ENST00000371820 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 SH2B1Q9NRF2 756 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 COL11A1P12107 1806 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-202ENST00000371820 ZNF213O14771 459 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 ATP2A1O14983 1001 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 SLC1A4P43007 532 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 ZSCAN23Q3MJ62 389 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 RRP12Q5JTH9 1297 aaKnown RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 CWC27Q6UX04 472 aaKnown RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 MFSD6Q6ZSS7 791 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 STAG1Q8WVM7 1258 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 UBE2OQ9C0C9 1292 aaKnown RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 TCP11L1Q9NUJ3 509 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 FBXO40Q9UH90 709 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 CTNNA3Q9UI47 895 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 DIS3Q9Y2L1 958 aaKnown RBP12.05□□□□□ -0.48
COL5A1-202ENST00000371820 RAD50Q92878 1312 aa12.05□□□□□ -0.48
COL5A1-202ENST00000371820 DNM1LO00429 736 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 SGSM2O43147 1006 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 PLA2G6O60733 806 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 PSMA5P28066 241 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 CNGA1P29973 690 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 GLIPR1L2Q4G1C9 344 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 CCDC178Q5BJE1 867 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
COL5A1-202ENST00000371820 REPS2Q8NFH8 660 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 ESR2Q92731 530 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 TTC14Q96N46 770 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 LAMA4Q16363 1823 aa12.04□□□□□ -0.48
COL5A1-202ENST00000371820 LTBP2Q14767 1821 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 COBLO75128 1261 aa12.03□□□□□ -0.48
COL5A1-202ENST00000371820 TOP1P11387 765 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms