RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SAT1P21673 171 aa16.63■□□□□ 0.25
COL5A1-201ENST00000371817 U2AF1L4Q8WU68 220 aaKnown RBP16.63■□□□□ 0.25
COL5A1-201ENST00000371817 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
COL5A1-201ENST00000371817 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 ACBD5Q5T8D3 534 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-201ENST00000371817 CDC37L1Q7L3B6 337 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 SMYD2Q9NRG4 433 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 STX18Q9P2W9 335 aaKnown RBP16.62■□□□□ 0.25
COL5A1-201ENST00000371817 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 PYGBP11216 843 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 ANO5Q75V66 913 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 GSDMAQ96QA5 445 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 GRM8O00222 908 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 NCF2P19878 526 aaPredicted RBP16.62■□□□□ 0.25
COL5A1-201ENST00000371817 SLC44A4Q53GD3 710 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 FBXO38Q6PIJ6 1188 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 FAM167BQ9BTA0 163 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 PARD6BQ9BYG5 372 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 KCNH5Q8NCM2 988 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 ENO4A6NNW6 628 aa16.62■□□□□ 0.25
COL5A1-201ENST00000371817 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 TEX9Q8N6V9 391 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 EXOC5O00471 708 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 BASP1P80723 227 aaKnown RBP16.61■□□□□ 0.25
COL5A1-201ENST00000371817 RAB44Q7Z6P3 723 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-201ENST00000371817 LRRC37BQ96QE4 947 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 HINFPQ9BQA5 517 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 ATP11BQ9Y2G3 1177 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 TMED2Q15363 201 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 C10orf88Q9H8K7 445 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 EHHADHQ08426 723 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
COL5A1-201ENST00000371817 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 CNGB3Q9NQW8 809 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 HEXIM1O94992 359 aaKnown RBP16.61■□□□□ 0.25
COL5A1-201ENST00000371817 SCG2P13521 617 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 GLE1Q53GS7 698 aaKnown RBP16.61■□□□□ 0.25
COL5A1-201ENST00000371817 NCAPH2Q6IBW4 605 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 LRRC8BQ6P9F7 803 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
COL5A1-201ENST00000371817 SERPINB2P05120 415 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ST5P78524 1137 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ACTN3Q08043 901 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ADCY2Q08462 1091 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 KIF22Q14807 665 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 NONOQ15233 471 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 CCDC85BQ15834 202 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 DEAF1O75398 565 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 TRIM8Q9BZR9 551 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 PYCARDQ9ULZ3 195 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 RINT1Q6NUQ1 792 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 MAFGO15525 162 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 RNF113AO15541 343 aaKnown RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 PDE1BQ01064 536 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 CARD10Q9BWT7 1032 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 BZW2Q9Y6E2 419 aaKnown RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 SOS1Q07889 1333 aaPredicted RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 C1orf146Q5VVC0 180 aa16.6■□□□□ 0.25
COL5A1-201ENST00000371817 MAGOHBQ96A72 148 aaKnown RBP16.6■□□□□ 0.25
COL5A1-201ENST00000371817 PARP1P09874 1014 aaKnown RBP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 PDE6CP51160 858 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 YWHAGP61981 247 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 CUL1Q13616 776 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 WDR70Q9NW82 654 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 TBK1Q9UHD2 729 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 ZNF148Q9UQR1 794 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 HADHQ16836 314 aaKnown RBP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 NUGGCQ68CJ6 796 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 MRPL40Q9NQ50 206 aaKnown RBP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 NDE1Q9NXR1 346 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 NSFP46459 744 aaKnown RBP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 SNX29Q8TEQ0 813 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 RNF14Q9UBS8 474 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 BACH1O14867 736 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 HLA-DPA1P20036 260 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 CALCRLQ16602 461 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 CRLF3Q8IUI8 442 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
COL5A1-201ENST00000371817 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 ANKRD2Q9GZV1 360 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 MMEP08473 750 aa16.59■□□□□ 0.25
COL5A1-201ENST00000371817 GOLGA8CPA6NN73 597 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 SGK1O00141 431 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 PDE6AP16499 860 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 KLC1Q07866 573 aa16.58■□□□□ 0.25
COL5A1-201ENST00000371817 EMBQ6PCB8 327 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms