RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 RTN1Q16799 776 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NAIF1Q69YI7 327 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 CRACR2BQ8N4Y2 399 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 MREGQ8N565 214 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 C3orf20Q8ND61 904 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 SMCR8Q8TEV9 937 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 PIK3R5Q8WYR1 880 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 TTYH3Q9C0H2 523 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.475e-7■■■□□ 15.8
CHD1L-203ENST00000369259 CAPN6Q9Y6Q1 641 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 C5P01031 1676 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NUTM2BA6NNL0 878 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NUTM2EB1AL46 878 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 BMP15O95972 392 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 SSBP05455 408 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 IFFO1Q0D2I5 559 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 CCDC96Q2M329 555 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NFRKBQ6P4R8 1299 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NUP58Q9BVL2 599 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 GDF3Q9NR23 364 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 RMND1Q9NWS8 449 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 SMARCAL1Q9NZC9 954 aa18.01■□□□□ 0.47
CHD1L-203ENST00000369259 NFAT5O94916 1531 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 FAM205CA6NFA0 338 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 DNM1LO00429 736 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 FAM153BP0C7A2 387 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 PRCPP42785 496 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 DNM2P50570 870 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 ZBED6P86452 979 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 PAK2Q13177 524 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 SPA17Q15506 151 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 FAM153CQ494X1 144 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 OSBPL7Q9BZF2 842 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
CHD1L-203ENST00000369259 INCENPQ9NQS7 918 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 ZSWIM5Q9P217 1185 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 FAM153AQ9UHL3 310 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 NFU1Q9UMS0 254 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 MAPK8IP1Q9UQF2 711 aa18■□□□□ 0.47
CHD1L-203ENST00000369259 TRIM21P19474 475 aaKnown RBP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 CARSP49589 748 aaKnown RBP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 ANKRD20A8PQ5CZ79 823 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 RETREG2Q8NC44 543 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 SH2D4AQ9H788 454 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 SLC52A2Q9HAB3 445 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 RBM28Q9NW13 759 aaKnown RBP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 SNRPA1P09661 255 aaKnown RBP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 SRGNP10124 158 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 ADD2P35612 726 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 CDK17Q00537 523 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 E2F5Q15329 346 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 PI16Q6UXB8 463 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 ARFGAP2Q8N6H7 521 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 BCCIPQ9P287 314 aaKnown RBP eCLIP17.99■□□□□ 0.47
CHD1L-203ENST00000369259 GDAQ9Y2T3 454 aa17.99■□□□□ 0.47
CHD1L-203ENST00000369259 GMNCA6NCL1 334 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 ZNF263O14978 683 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 CXCR5P32302 372 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 SLC8A3P57103 927 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 PDXDC2PQ6P474 469 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 CCDC42Q96M95 316 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 MTRQ99707 1265 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 MLXIPQ9HAP2 919 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 FRMD3A2A2Y4 597 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 ANKRD18BA2A2Z9 1011 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 TRIM49BA6NDI0 452 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 MOCS3O95396 460 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 RPN1P04843 607 aaKnown RBP17.98■□□□□ 0.47
CHD1L-203ENST00000369259 GLI1P08151 1106 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 GBP2P32456 591 aaPredicted RBP17.98■□□□□ 0.47
CHD1L-203ENST00000369259 CTDSPL2Q05D32 466 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 ZKSCAN8Q15776 578 aaPredicted RBP17.98■□□□□ 0.47
CHD1L-203ENST00000369259 SPRED3Q2MJR0 410 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 TAX1BP1Q86VP1 789 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 CMTR1Q8N1G2 835 aaKnown RBP17.98■□□□□ 0.47
CHD1L-203ENST00000369259 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 ALS2CR12Q96Q35 445 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 PSMB7Q99436 277 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 THAP9Q9H5L6 903 aa17.98■□□□□ 0.47
CHD1L-203ENST00000369259 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 XRCC4Q13426 336 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 NAA25Q14CX7 972 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 IFT81Q8WYA0 676 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 PYM1Q9BRP8 204 aaKnown RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 EPB41L5Q9HCM4 733 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 EXOC1Q9NV70 894 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 CWC25Q9NXE8 425 aaPredicted RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 B4DLN1 442 aa17.97■□□□□ 0.47
CHD1L-203ENST00000369259 LACTB2Q53H82 288 aaPredicted RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 EARS2Q5JPH6 523 aaKnown RBP17.97■□□□□ 0.47
CHD1L-203ENST00000369259 KRT26Q7Z3Y9 468 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms