RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CASP1P29466 404 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 CYLC1P35663 651 aaPredicted RBP19.5■□□□□ 0.71
CHTOP-203ENST00000368690 SKOR1P84550 965 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 SEMA3FQ13275 785 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 SUSD4Q5VX71 490 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 CCDC170Q8IYT3 715 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 DOCK2Q92608 1830 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 EEF1GP26641 437 aaKnown RBP19.5■□□□□ 0.71
CHTOP-203ENST00000368690 PDXDC2PQ6P474 469 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 RETREG2Q8NC44 543 aa19.5■□□□□ 0.71
CHTOP-203ENST00000368690 GRIN2DO15399 1336 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 CLSTN1O94985 981 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 ATP2C1P98194 919 aaPredicted RBP19.49■□□□□ 0.71
CHTOP-203ENST00000368690 CTDSPL2Q05D32 466 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 WDR59Q6PJI9 974 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 RPAINQ86UA6 219 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 ZNF507Q8TCN5 953 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
CHTOP-203ENST00000368690 TACC3Q9Y6A5 838 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 MYH2Q9UKX2 1941 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 MYBL2P10244 700 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 PRLRP16471 622 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 GNAT2P19087 354 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 ALS2CLQ60I27 953 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 KIAA1328Q86T90 577 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 AMIGO3Q86WK7 504 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 VGLL2Q8N8G2 317 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 BCAS4Q8TDM0 211 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 ZBTB9Q96C00 473 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 NUP58Q9BVL2 599 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 TSGA10Q9BZW7 698 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 INCENPQ9NQS7 918 aa19.49■□□□□ 0.71
CHTOP-203ENST00000368690 PDS5AQ29RF7 1337 aaKnown RBP19.48■□□□□ 0.71
CHTOP-203ENST00000368690 RTL9Q8NET4 1388 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
CHTOP-203ENST00000368690 CDK17Q00537 523 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 B4GALNT4Q76KP1 1039 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 CNPY4Q8N129 248 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 CAGE1Q8TC20 777 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 KAT2BQ92831 832 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 RNF41Q9H4P4 317 aaPredicted RBP19.48■□□□□ 0.71
CHTOP-203ENST00000368690 THAP9Q9H5L6 903 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 ARAP2Q8WZ64 1704 aa19.48■□□□□ 0.71
CHTOP-203ENST00000368690 SRGAP2O75044 1071 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 PARP10Q53GL7 1025 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 TNFRSF25Q93038 417 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 RNF216Q9NWF9 866 aaPredicted RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 PRPF3O43395 683 aaKnown RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 ZEB2O60315 1214 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 IPO7O95373 1038 aaKnown RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 APBA3O96018 575 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 TNFRSF8P28908 595 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 HNRNPH1P31943 449 aaKnown RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 RFC4P35249 363 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 CLEC4GQ6UXB4 293 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 IRF2BP1Q8IU81 584 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 TTLL11Q8NHH1 800 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 NACAP1Q9BZK3 213 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
CHTOP-203ENST00000368690 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
CHTOP-203ENST00000368690 BCORQ6W2J9 1755 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 GSG1L2A8MUP6 293 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PDE2AO00408 941 aaPredicted RBP19.46■□□□□ 0.71
CHTOP-203ENST00000368690 INPP5BP32019 993 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 TRAPPC10P48553 1259 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 LIG3P49916 1009 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 DNM2P50570 870 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PKN1Q16512 942 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 TTC38Q5R3I4 469 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 EMBQ6PCB8 327 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 NOC3LQ8WTT2 800 aaKnown RBP19.46■□□□□ 0.71
CHTOP-203ENST00000368690 SHISA4Q96DD7 197 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 CAPZA3Q96KX2 299 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PAGR1Q9BTK6 254 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 A1CFQ9NQ94 594 aaKnown RBP19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PNPLA7Q6ZV29 1317 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 FAM205CA6NFA0 338 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 CTSWP56202 376 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 GNGT1P63211 74 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 SLC27A3Q5K4L6 730 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 LDHAL6AQ6ZMR3 332 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PRPF38AQ8NAV1 312 aaKnown RBP19.46■□□□□ 0.71
CHTOP-203ENST00000368690 TOMM22Q9NS69 142 aa19.46■□□□□ 0.71
CHTOP-203ENST00000368690 ZNHIT6Q9NWK9 470 aaKnown RBP19.46■□□□□ 0.71
CHTOP-203ENST00000368690 PDE8AO60658 829 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 MBD4O95243 580 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 RPN1P04843 607 aaKnown RBP19.45■□□□□ 0.7
CHTOP-203ENST00000368690 EPHB4P54760 987 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 MAP3K12Q12852 859 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 NNTQ13423 1086 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 TXNRD1Q16881 649 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 CAVIN3Q969G5 261 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 IQCDQ96DY2 449 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 MTRQ99707 1265 aa19.45■□□□□ 0.7
CHTOP-203ENST00000368690 TACO1Q9BSH4 297 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms