RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 HMGB1P09429 215 aaKnown RBP21.63■■□□□ 1.05
CHTOP-202ENST00000368687 TMEM67Q5HYA8 995 aa21.63■■□□□ 1.05
CHTOP-202ENST00000368687 MAP3K21Q5TCX8 1036 aa21.63■■□□□ 1.05
CHTOP-202ENST00000368687 ACAD9Q9H845 621 aa21.63■■□□□ 1.05
CHTOP-202ENST00000368687 GPCPD1Q9NPB8 672 aa21.63■■□□□ 1.05
CHTOP-202ENST00000368687 PAK6Q9NQU5 681 aaPredicted RBP21.63■■□□□ 1.05
CHTOP-202ENST00000368687 PFASO15067 1338 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 WDR19Q8NEZ3 1342 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 PRKAR2AP13861 404 aaKnown RBP21.62■■□□□ 1.05
CHTOP-202ENST00000368687 GJA8P48165 433 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 RASGRP2Q7LDG7 609 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 CATIPQ7Z7H3 387 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 MSL3Q8N5Y2 521 aaKnown RBP21.62■■□□□ 1.05
CHTOP-202ENST00000368687 DDX11Q96FC9 970 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 CCPG1Q9ULG6 757 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 TAF6LQ9Y6J9 622 aa21.62■■□□□ 1.05
CHTOP-202ENST00000368687 ZNF536O15090 1300 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 SLC16A2P36021 539 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 TTBK2Q6IQ55 1244 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 ANKRD35Q8N283 1001 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 CHMP4CQ96CF2 233 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 MAP3K14Q99558 947 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHTOP-202ENST00000368687 UNC93B1Q9H1C4 597 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 RIPK3Q9Y572 518 aa21.61■■□□□ 1.05
CHTOP-202ENST00000368687 PRC1O43663 620 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 CCDC174Q6PII3 467 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 NPLOC4Q8TAT6 608 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 IGDCC4Q8TDY8 1250 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 SHISA4Q96DD7 197 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 MAF1Q9H063 256 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 RNF146Q9NTX7 359 aa21.6■■□□□ 1.05
CHTOP-202ENST00000368687 MYH6P13533 1939 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 MSCO60682 206 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 COBLO75128 1261 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 DDAH1O94760 285 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 LIFRP42702 1097 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 SLC4A3P48751 1232 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 ANTXR2P58335 489 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 CCL14Q16627 93 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 ZNF467Q7Z7K2 595 aaPredicted RBP21.59■■□□□ 1.05
CHTOP-202ENST00000368687 U2AF1L4Q8WU68 220 aaKnown RBP21.59■■□□□ 1.05
CHTOP-202ENST00000368687 MAML3Q96JK9 1138 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 AGBL1Q96MI9 1066 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 TRERF1Q96PN7 1200 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 NEK1Q96PY6 1258 aa21.59■■□□□ 1.05
CHTOP-202ENST00000368687 DNAJC25-GNG10A0A024R161 153 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 SGPL1O95470 568 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 IGHA2P01877 340 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 GOLGA8HP0CJ92 632 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 CALM1P0DP23 149 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 CALM2P0DP24 149 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 CALM3P0DP25 149 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 ALAS1P13196 640 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 HSPA4P34932 840 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 CACNB2Q08289 660 aaPredicted RBP21.58■■□□□ 1.05
CHTOP-202ENST00000368687 TRAF1Q13077 416 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 ZNF792Q3KQV3 632 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 KCNB2Q92953 911 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 HOMER2Q9NSB8 354 aa21.58■■□□□ 1.05
CHTOP-202ENST00000368687 KIF5BP33176 963 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 TROAPQ12815 778 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 GRM4Q14833 912 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 CHST3Q7LGC8 479 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 DEFB118Q96PH6 123 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 LY9Q9HBG7 655 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 FLRT1Q9NZU1 646 aa21.57■■□□□ 1.04
CHTOP-202ENST00000368687 SYNGAP1Q96PV0 1343 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 PALM3A6NDB9 673 aaPredicted RBP21.56■■□□□ 1.04
CHTOP-202ENST00000368687 CCDC69A6NI79 296 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 KLRF2D3W0D1 207 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 SH2B2O14492 632 aaPredicted RBP21.56■■□□□ 1.04
CHTOP-202ENST00000368687 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
CHTOP-202ENST00000368687 PGK2P07205 417 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 NFXL1Q6ZNB6 911 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 DHX32Q7L7V1 743 aaKnown RBP21.56■■□□□ 1.04
CHTOP-202ENST00000368687 ADGRF4Q8IZF3 695 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 ANKLE1Q8NAG6 615 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 CTCFLQ8NI51 663 aaPredicted RBP21.56■■□□□ 1.04
CHTOP-202ENST00000368687 TINF2Q9BSI4 451 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 CRISPLD2Q9H0B8 497 aa21.56■■□□□ 1.04
CHTOP-202ENST00000368687 PSMA5P28066 241 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 GNAQP50148 359 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 TRIM32Q13049 653 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 CDC37Q16543 378 aaPredicted RBP21.55■■□□□ 1.04
CHTOP-202ENST00000368687 SGMS1Q86VZ5 419 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 ZNF654Q8IZM8 581 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 LZTS2Q9BRK4 669 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 A1CFQ9NQ94 594 aaKnown RBP21.55■■□□□ 1.04
CHTOP-202ENST00000368687 MAD2L2Q9UI95 211 aa21.55■■□□□ 1.04
CHTOP-202ENST00000368687 LOC102724159A0A0B4J2E5 919 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 POTEB2H3BUK9 544 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 TFRCP02786 760 aaKnown RBP21.54■■□□□ 1.04
CHTOP-202ENST00000368687 CYBAP13498 195 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 CYP2C19P33261 490 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 PWP2Q15269 919 aaKnown RBP21.54■■□□□ 1.04
CHTOP-202ENST00000368687 PRPF38BQ5VTL8 546 aaKnown RBP21.54■■□□□ 1.04
CHTOP-202ENST00000368687 MAMDC4Q6UXC1 1216 aa21.54■■□□□ 1.04
CHTOP-202ENST00000368687 SYNE3Q6ZMZ3 975 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms