RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 WTAPQ15007 396 aa23.28■■□□□ 1.32
H3F3A-204ENST00000366816 GPATCH4Q5T3I0 446 aaKnown RBP23.28■■□□□ 1.32
H3F3A-204ENST00000366816 IGDCC4Q8TDY8 1250 aa23.28■■□□□ 1.32
H3F3A-204ENST00000366816 DEFB118Q96PH6 123 aa23.28■■□□□ 1.32
H3F3A-204ENST00000366816 RANBP17Q9H2T7 1088 aaKnown RBP23.28■■□□□ 1.32
H3F3A-204ENST00000366816 MAP3K21Q5TCX8 1036 aa23.27■■□□□ 1.32
H3F3A-204ENST00000366816 RNF20Q5VTR2 975 aa23.27■■□□□ 1.32
H3F3A-204ENST00000366816 STAG2Q8N3U4 1231 aa23.27■■□□□ 1.32
H3F3A-204ENST00000366816 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.27■■□□□ 1.32
H3F3A-204ENST00000366816 HMX1Q9NP08 348 aaPredicted RBP23.27■■□□□ 1.32
H3F3A-204ENST00000366816 PAK6Q9NQU5 681 aaPredicted RBP23.27■■□□□ 1.32
H3F3A-204ENST00000366816 RPTORQ8N122 1335 aa23.27■■□□□ 1.32
H3F3A-204ENST00000366816 PARP1P09874 1014 aaKnown RBP23.26■■□□□ 1.31
H3F3A-204ENST00000366816 CCND3P30281 292 aaPredicted RBP23.26■■□□□ 1.31
H3F3A-204ENST00000366816 MCM5P33992 734 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 SART3Q15020 963 aaKnown RBP23.26■■□□□ 1.31
H3F3A-204ENST00000366816 MFSD14CQ5VZR4 134 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 CHST13Q8NET6 341 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 U2AF1L4Q8WU68 220 aaKnown RBP23.26■■□□□ 1.31
H3F3A-204ENST00000366816 SHISA4Q96DD7 197 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 DDX11Q96FC9 970 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 MAML3Q96JK9 1138 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 LRRC2Q9BYS8 371 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 SLC5A4Q9NY91 659 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 CCPG1Q9ULG6 757 aa23.26■■□□□ 1.31
H3F3A-204ENST00000366816 ZNF236Q9UL36 1845 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 IGHA2P01877 340 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ICAM1P05362 532 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 GJA8P48165 433 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ZNF792Q3KQV3 632 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ADCK5Q3MIX3 580 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 MUM1L1Q5H9M0 696 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ANKRD35Q8N283 1001 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 LY9Q9HBG7 655 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 VAT1LQ9HCJ6 419 aa23.25■■□□□ 1.31
H3F3A-204ENST00000366816 ZNFX1Q9P2E3 1918 aaKnown RBP23.25■■□□□ 1.31
H3F3A-204ENST00000366816 SGPL1O95470 568 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 PRAMEF19Q5SWL8 479 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 OLFML2BQ68BL8 750 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 ADGRF4Q8IZF3 695 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 ACAD9Q9H845 621 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 FBXO40Q9UH90 709 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 MAD2L2Q9UI95 211 aa23.24■■□□□ 1.31
H3F3A-204ENST00000366816 RBBP6Q7Z6E9 1792 aaKnown RBP23.24■■□□□ 1.31
H3F3A-204ENST00000366816 TFRCP02786 760 aaKnown RBP23.23■■□□□ 1.31
H3F3A-204ENST00000366816 TRPV1Q8NER1 839 aa23.23■■□□□ 1.31
H3F3A-204ENST00000366816 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
H3F3A-204ENST00000366816 DNAJC25-GNG10A0A024R161 153 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 KLRF2D3W0D1 207 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 SH2B2O14492 632 aaPredicted RBP23.22■■□□□ 1.31
H3F3A-204ENST00000366816 DHX16O60231 1041 aaKnown RBP23.22■■□□□ 1.31
H3F3A-204ENST00000366816 REC8O95072 547 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 TROAPQ12815 778 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 TKFCQ3LXA3 575 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 TSGA10IPQ3SY00 556 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 TCEANC2Q96MN5 208 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 MYL10Q9BUA6 226 aa23.22■■□□□ 1.31
H3F3A-204ENST00000366816 A1CFQ9NQ94 594 aaKnown RBP23.22■■□□□ 1.31
H3F3A-204ENST00000366816 SMCHD1A6NHR9 2005 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 PALM3A6NDB9 673 aaPredicted RBP23.21■■□□□ 1.31
H3F3A-204ENST00000366816 CNGA1P29973 690 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 HSPA4P34932 840 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 CNTN2Q02246 1040 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 GRM4Q14833 912 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
H3F3A-204ENST00000366816 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 NUP133Q8WUM0 1156 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
H3F3A-204ENST00000366816 CPA1P15085 419 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
H3F3A-204ENST00000366816 USH1GQ495M9 461 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 NSMFQ6X4W1 530 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 NFXL1Q6ZNB6 911 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 TMEM87BQ96K49 555 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 TINF2Q9BSI4 451 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 DIS3Q9Y2L1 958 aaKnown RBP23.2■■□□□ 1.3
H3F3A-204ENST00000366816 SNX14Q9Y5W7 946 aa23.2■■□□□ 1.3
H3F3A-204ENST00000366816 NFIBO00712 420 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 CYBAP13498 195 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 SLC35G1Q2M3R5 365 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 ZNF654Q8IZM8 581 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 KCNB2Q92953 911 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 FGD4Q96M96 766 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 PURBQ96QR8 312 aaKnown RBP23.19■■□□□ 1.3
H3F3A-204ENST00000366816 MTA3Q9BTC8 594 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 CRISPLD2Q9H0B8 497 aa23.19■■□□□ 1.3
H3F3A-204ENST00000366816 CCDC69A6NI79 296 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 POTEB2H3BUK9 544 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 EXOSC10Q01780 885 aaKnown RBP23.18■■□□□ 1.3
H3F3A-204ENST00000366816 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 LHX8Q68G74 356 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 CLEC4DQ8WXI8 215 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 CYP39A1Q9NYL5 469 aa23.18■■□□□ 1.3
H3F3A-204ENST00000366816 PLXNA1Q9UIW2 1896 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 RXRAP19793 462 aa23.17■■□□□ 1.3
H3F3A-204ENST00000366816 LIFRP42702 1097 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms