RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 USP14P54578 494 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 ST3GAL1Q11201 340 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCL14Q16627 93 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 GPATCH4Q5T3I0 446 aaKnown RBP7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 TMTC3Q6ZXV5 915 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 TRIM22Q8IYM9 498 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 DCAF4Q8WV16 495 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 LPAR1Q92633 364 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 FAM161BQ96MY7 647 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 LZTS2Q9BRK4 669 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 HTATIP2Q9BUP3 242 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 CRISPLD2Q9H0B8 497 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 VCPKMTQ9H867 229 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 CWC22Q9HCG8 908 aaKnown RBP7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 TXNRD2Q9NNW7 524 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 TMX2Q9Y320 296 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 NR2E3Q9Y5X4 410 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 MYH4Q9Y623 1939 aa7.86□□□□□ -1.15
RNU1-55P-201ENST00000365510 PHIPQ8WWQ0 1821 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 STK36Q9NRP7 1315 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 NDUFB10O96000 172 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 SNHG28P0DPA3 235 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 CDC27P30260 824 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 AKAP17AQ02040 695 aaKnown RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 ZNF543Q08ER8 600 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 SLFN13Q68D06 897 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 FASTKD5Q7L8L6 764 aaKnown RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 FAM184AQ8NB25 1140 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 ZNF280CQ8ND82 737 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 SLAIN1Q8ND83 568 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 NSUN7Q8NE18 718 aaKnown RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 SMCR8Q8TEV9 937 aaPredicted RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 TRIB2Q92519 343 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 GMCL1Q96IK5 515 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 GDF15Q99988 308 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 WDR18Q9BV38 432 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 KIAA1683Q9H0B3 1180 aa7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 PAK6Q9NQU5 681 aaPredicted RBP7.85□□□□□ -1.15
RNU1-55P-201ENST00000365510 FRMPD2Q68DX3 1309 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 CNTNAP5Q8WYK1 1306 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 A0A0C4DFX4 3053 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 A0A1W2PRG0 241 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 PALM3A6NDB9 673 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 USP17L10C9JJH3 530 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 F5H6K3 240 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 JAK2O60674 1132 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 PLEKHA8P1O95397 391 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 CTDNEP1O95476 244 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 IFNAR1P17181 557 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 PDCP20941 246 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 GJB2P29033 226 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 CCND3P30281 292 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 MAGEA10P43363 369 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 BACE1P56817 501 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 KLRC3Q07444 240 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SSRP1Q08945 709 aaKnown RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 IKQ13123 557 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 MTMR2Q13614 643 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 ZYXQ15942 572 aaKnown RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 USP17L2Q6R6M4 530 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SIAH1Q8IUQ4 282 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SPICE1Q8N0Z3 855 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 DEFB123Q8N688 67 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SMARCC2Q8TAQ2 1214 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 ACER1Q8TDN7 264 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 WASF1Q92558 559 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 DDX11Q96FC9 970 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SLC26A6Q9BXS9 759 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 RNF26Q9BY78 433 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 FAM217BQ9NTX9 383 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 TMOD4Q9NZQ9 345 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 ORC3Q9UBD5 711 aaPredicted RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 SEC63Q9UGP8 760 aaKnown RBP7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 MAD2L2Q9UI95 211 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 AGTPBP1Q9UPW5 1226 aa7.84□□□□□ -1.15
RNU1-55P-201ENST00000365510 PTPRFP10586 1907 aa7.84□□□□□ -1.16
RNU1-55P-201ENST00000365510 COL6A3P12111 3177 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 C19orf81C9J6K1 198 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 KLRF2D3W0D1 207 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 WDR46O15213 610 aaKnown RBP7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 DEXIO95424 95 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 GOLGA8HP0CJ92 632 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 BMP3P12645 472 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 VCAM1P19320 739 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 SMARCA1P28370 1054 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 STAT2P52630 851 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 IRF5Q13568 498 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 NTRK3Q16288 839 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 KCTD1Q719H9 257 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 RASGRP2Q7LDG7 609 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 NECAB2Q7Z6G3 386 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 STAG2Q8N3U4 1231 aa7.83□□□□□ -1.16
RNU1-55P-201ENST00000365510 PXYLP1Q8TE99 480 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms