RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 GP2P55259 537 aaKnown RBP7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 NME9Q86XW9 330 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 STK11IPQ8N1F8 1099 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 FBXL18Q96ME1 805 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 WNT10AQ9GZT5 417 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 PRDM10Q9NQV6 1147 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 GTF2IRD1Q9UHL9 959 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 KAT6BQ8WYB5 2073 aa7.3□□□□□ -1.24
RNU4-4P-201ENST00000364588 EXOC5O00471 708 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 YY1P25490 414 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 CAP2P40123 477 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 PDE4BQ07343 736 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 TXNRD1Q16881 649 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 CCDC39Q9UFE4 941 aa7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 ZC3H7BQ9UGR2 993 aaKnown RBP7.29□□□□□ -1.24
RNU4-4P-201ENST00000364588 TNS2Q63HR2 1409 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 LMNB2Q03252 620 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 MRPL58Q14197 206 aaKnown RBP7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 RELL1Q8IUW5 271 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 HID1Q8IV36 788 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 NETO1Q8TDF5 533 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 RHOVQ96L33 236 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 RSRP1Q9BUV0 290 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 CARD11Q9BXL7 1154 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 TLR6Q9Y2C9 796 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 CCDC7Q96M83 1385 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 NINLQ9Y2I6 1382 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 CD163L1Q9NR16 1453 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 MYOM1P52179 1685 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 NHSQ6T4R5 1651 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 USP54Q70EL1 1684 aa7.28□□□□□ -1.24
RNU4-4P-201ENST00000364588 BCL9O00512 1426 aa7.27□□□□□ -1.24
RNU4-4P-201ENST00000364588 ABCC6O95255 1503 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 LEFTY1O75610 366 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 CEACAM5P06731 702 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 GRK4P32298 578 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 IFI16Q16666 785 aaKnown RBP7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 ZNF746Q6NUN9 644 aaPredicted RBP7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 HDGFL2Q7Z4V5 671 aaPredicted RBP7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 UBE3DQ7Z6J8 389 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 MFSD2AQ8NA29 543 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 AGBL5Q8NDL9 886 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 FLCNQ8NFG4 579 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 TMEM74Q96NL1 305 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 FOXQ1Q9C009 403 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 STK32BQ9NY57 414 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 BTAF1O14981 1849 aa7.27□□□□□ -1.25
RNU4-4P-201ENST00000364588 IGF2BP3O00425 579 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 GFRA2O00451 464 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 IL2RBP14784 551 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 GBP2P32456 591 aaPredicted RBP7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 CAMK2GQ13555 558 aaPredicted RBP7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 SLC15A2Q16348 729 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 SNAP47Q5SQN1 464 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 FAM181AQ8N9Y4 354 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 PRDM5Q9NQX1 630 aaPredicted RBP7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 ADAM30Q9UKF2 790 aa7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 EDC4Q6P2E9 1401 aaKnown RBP7.26□□□□□ -1.25
RNU4-4P-201ENST00000364588 A0A1W2PP64 1363 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 TONSLQ96HA7 1378 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 GNAT3A8MTJ3 354 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 PGRP06401 933 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 ZNF16P17020 682 aaPredicted RBP7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 CDK8P49336 464 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 HS2ST1Q7LGA3 356 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 ERMP1Q7Z2K6 904 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 GATAD2BQ8WXI9 593 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 LTV1Q96GA3 475 aaPredicted RBP7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 MIPEPQ99797 713 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 TERF2IPQ9NYB0 399 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 SLC5A6Q9Y289 635 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 OAS3Q9Y6K5 1087 aaKnown RBP7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 RGPD2P0DJD1 1756 aa7.25□□□□□ -1.25
RNU4-4P-201ENST00000364588 PAPPAQ13219 1627 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 TMEM265A0A087WTH1 108 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 ADAMTS4O75173 837 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 CILPO75339 1184 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 PF4P02776 101 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 IRAK1P51617 712 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 OXCT1P55809 520 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 SLBPQ14493 270 aaKnown RBP eCLIP7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 MRPL41Q8IXM3 137 aaKnown RBP7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 PLD6Q8N2A8 252 aaKnown RBP7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 JARID2Q92833 1246 aaPredicted RBP7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 COX4I2Q96KJ9 171 aa7.24□□□□□ -1.25
RNU4-4P-201ENST00000364588 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 CST3P01034 146 aaPredicted RBP7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 ITIH2P19823 946 aa7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 FBLN1P23142 703 aa7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 NKG7Q16617 165 aa7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 ZNF827Q17R98 1081 aa7.23□□□□□ -1.25
RNU4-4P-201ENST00000364588 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms