RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TEX14Q8IWB6 1497 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 DLEC1Q9Y238 1755 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ARFGEF2Q9Y6D5 1785 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 RGS19P49795 217 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 LIG3P49916 1009 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 RNF144AP50876 292 aaPredicted RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ATXN1P54253 815 aaKnown RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ANKRD39Q53RE8 183 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 FGD2Q7Z6J4 655 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 SPATA9Q9BWV2 254 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCDC8Q9H0W5 538 aaPredicted RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 EPHX3Q9H6B9 360 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 C9orf78Q9NZ63 289 aaPredicted RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ANAPC4Q9UJX5 808 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 SYNGAP1Q96PV0 1343 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 PTPRKQ15262 1439 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 KRBA1A5PL33 1030 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 EREGO14944 169 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 S100BP04271 92 aaPredicted RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 BIRC2Q13490 618 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 NXPE4Q6UWF7 544 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 C1orf127Q8N9H9 656 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZSCAN1Q8NBB4 408 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 TIFAQ96CG3 184 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 TMEM60Q9H2L4 133 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ANKIB1Q9P2G1 1089 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 SERPINB13Q9UIV8 391 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 NWD2Q9ULI1 1742 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 EOMESO95936 686 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 KRT1P04264 644 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 CKMT1AP12532 417 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 PDIA3P30101 505 aaKnown RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 BAG6P46379 1132 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 LRRC69Q6ZNQ3 347 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 CYFIP1Q7L576 1253 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 FAM133AQ8N9E0 248 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 PUS7LQ9H0K6 701 aaKnown RBP2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 EPN3Q9H201 632 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZIM2Q9NZV7 527 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 POLG2Q9UHN1 485 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 LY75O60449 1722 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 ASXL2Q76L83 1435 aa2.47□□□□□ -2.01
SMARCAD1-202ENST00000359052 COL5A3P25940 1745 aaPredicted RBP2.46□□□□□ -2.01
SMARCAD1-202ENST00000359052 SENP3-EIF4A1A0A087X0R7 540 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 KATNA1O75449 491 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 LGR5O75473 907 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 MTA2O94776 668 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 B3GALT4O96024 378 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 NRLP54845 237 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PKN3Q6P5Z2 889 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 OVCH1Q7RTY7 1134 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 NIM1KQ8IY84 436 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ALDH16A1Q8IZ83 802 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 IFNL2Q8IZJ0 200 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TTC30BQ8N4P2 665 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM163AQ96GL9 167 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TSGA13Q96PP4 275 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PTPRMP28827 1452 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TSPOAP1O95153 1857 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 CPNE3O75131 537 aaKnown RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZBED1O96006 694 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 CELA3AP09093 270 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ENPP1P22413 925 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 EIF4BP23588 611 aaKnown RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 UBA7P41226 1012 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZAP70P43403 619 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 GRM3Q14832 879 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TNNI3KQ59H18 835 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PERM1Q5SV97 790 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 RNF219Q5W0B1 726 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPP4R3AQ6IN85 833 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZNF280DQ6N043 979 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 CCBE1Q6UXH8 406 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 SMC1BQ8NDV3 1235 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 USP33Q8TEY7 942 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 JPH3Q8WXH2 748 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 VPS33BQ9H267 617 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ANTXR1Q9H6X2 564 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 POGZQ7Z3K3 1410 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 AGAP14A8MT82 685 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM155AB1AL88 458 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 RASGRP1O95267 797 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 COPB2P35606 906 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 SOX18P35713 384 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 CD86P42081 329 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 USP5P45974 858 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPP2R5AQ15172 486 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TXNDC11Q6PKC3 985 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZNF784Q8NCA9 323 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TMEM120AQ9BXJ8 343 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 NPHS2Q9NP85 383 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PPT2Q9UMR5 302 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 MYO1FO00160 1098 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 WNT10BO00744 389 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 TERTO14746 1132 aaKnown RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 PAK3O75914 559 aaPredicted RBP2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 GJB1P08034 283 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 SEC24CP53992 1094 aa2.46□□□□□ -2.02
SMARCAD1-202ENST00000359052 STARD6P59095 220 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms