RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 GJB1P08034 283 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 SLC10A3P09131 477 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 MATR3P43243 847 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMC1B-201ENST00000357450 GCLCP48506 637 aaPredicted RBP4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PRR20EP86478 221 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PRR20CP86479 221 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PRR20DP86480 221 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PRR20BP86481 221 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PRR20AP86496 221 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 MECOMQ03112 1051 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 BMS1Q14692 1282 aaKnown RBP4.41□□□□□ -1.7
SMC1B-201ENST00000357450 UTP14CQ5TAP6 766 aaKnown RBP4.41□□□□□ -1.7
SMC1B-201ENST00000357450 CDC42EP5Q6NZY7 148 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 SEPT14Q6ZU15 432 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 RPAP3Q9H6T3 665 aaPredicted RBP4.41□□□□□ -1.7
SMC1B-201ENST00000357450 KIAA1468Q9P260 1216 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 PPP2R3BQ9Y5P8 575 aa4.41□□□□□ -1.7
SMC1B-201ENST00000357450 TRANK1O15050 2925 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 FRYLO94915 3013 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 CCDC69A6NI79 296 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L15C9J2P7 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L13C9JLJ4 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L11C9JVI0 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L18D6R9N7 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L22D6RA61 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L17D6RBQ6 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L19D6RCP7 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L20D6RJB6 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 FOSL2P15408 326 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L24Q0WX57 530 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 SEPT2Q15019 361 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 SNRNP48Q6IEG0 339 aaKnown RBP4.4□□□□□ -1.7
SMC1B-201ENST00000357450 FOXP4Q8IVH2 680 aaPredicted RBP4.4□□□□□ -1.7
SMC1B-201ENST00000357450 SCYL3Q8IZE3 742 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 ABI1Q8IZP0 508 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 MYOCDQ8IZQ8 938 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 SMARCC2Q8TAQ2 1214 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 CHURC1Q8WUH1 139 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 ARHGAP45Q92619 1136 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 PPP2R3CQ969Q6 453 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 UBXN6Q9BZV1 441 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 CCPG1Q9ULG6 757 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 GON4LQ3T8J9 2241 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 CDHR2Q9BYE9 1310 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 LTBP3Q9NS15 1303 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 CHD9Q3L8U1 2897 aa4.4□□□□□ -1.7
SMC1B-201ENST00000357450 URB1O60287 2271 aaKnown RBP4.4□□□□□ -1.7
SMC1B-201ENST00000357450 GDF9O60383 454 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 CHGBP05060 677 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 ZBTB48P10074 688 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 CDK11BP21127 795 aaKnown RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 SP100P23497 879 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 PPM1FP49593 454 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 CWC27Q6UX04 472 aaKnown RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 ZFRQ96KR1 1074 aaKnown RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 EP300Q09472 2414 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 RIC1Q4ADV7 1423 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 H0YGN5 161 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 STAT3P40763 770 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 NFX1Q12986 1120 aaKnown RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 FAM47AQ5JRC9 791 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 EPHA10Q5JZY3 1008 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 USP17L2Q6R6M4 530 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 MFSD6Q6ZSS7 791 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 FAM43AQ8N2R8 423 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 PAF1Q8N7H5 531 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 CTCFLQ8NI51 663 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 UNC93B1Q9H1C4 597 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 KCNF1Q9H3M0 494 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.4□□□□□ -1.71
SMC1B-201ENST00000357450 SRRDQ9UH36 339 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 ZSWIM8A7E2V4 1837 aa4.4□□□□□ -1.71
SMC1B-201ENST00000357450 H7C1W4 665 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 DPYSL4O14531 572 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 AVPP01185 164 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 ACTN1P12814 892 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 KIF5BP33176 963 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CCL23P55773 120 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 RASGRF1Q13972 1273 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CCDC144CPQ8IYA2 1237 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 SH3RF3Q8TEJ3 882 aaPredicted RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 DRC1Q96MC2 740 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 LARP6Q9BRS8 491 aaKnown RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 DCTPP1Q9H773 170 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 PAG1Q9NWQ8 432 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CFAP47Q6ZTR5 3102 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF213O14771 459 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 IFIT3O14879 490 aaKnown RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 TLR2O60603 784 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 PGK1P00558 417 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 MAPK4P31152 587 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 ADCYAP1R1P41586 468 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 RFX5P48382 616 aaPredicted RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 PPATQ06203 517 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 TRIM28Q13263 835 aaKnown RBP4.39□□□□□ -1.71
SMC1B-201ENST00000357450 CRY2Q49AN0 593 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 BRI3BPQ8WY22 251 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 ZKSCAN3Q9BRR0 538 aa4.39□□□□□ -1.71
SMC1B-201ENST00000357450 RAVER2Q9HCJ3 691 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms