RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ZNF831Q5JPB2 1677 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 CCDC194A0A1B0GVG4 234 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 PSMA7O14818 248 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 CASP8Q14790 479 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 MEA1Q16626 185 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 STAG2Q8N3U4 1231 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 PNMA1Q8ND90 353 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 TRIM47Q96LD4 638 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 IL17RBQ9NRM6 502 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 PCDHA6Q9UN73 950 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 PCDHA8Q9Y5H6 950 aa27.53■■■□□ 2
CPNE1-202ENST00000352393 IRX5P78411 483 aaPredicted RBP27.52■■■□□ 2
CPNE1-202ENST00000352393 STIM1Q13586 685 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 NOC3LQ8WTT2 800 aaKnown RBP27.52■■■□□ 2
CPNE1-202ENST00000352393 TTYH3Q9C0H2 523 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 NT5C2P49902 561 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 ZSCAN26Q16670 478 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 SLC35G1Q2M3R5 365 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
CPNE1-202ENST00000352393 CCDC148Q8NFR7 591 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 VPS18Q9P253 973 aa27.52■■■□□ 2
CPNE1-202ENST00000352393 AHDC1Q5TGY3 1603 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-202ENST00000352393 SRGNP10124 158 aa27.51■■□□□ 1.99
CPNE1-202ENST00000352393 HIBADHP31937 336 aaKnown RBP27.51■■□□□ 1.99
CPNE1-202ENST00000352393 LMAN1P49257 510 aa27.51■■□□□ 1.99
CPNE1-202ENST00000352393 DNM2P50570 870 aa27.51■■□□□ 1.99
CPNE1-202ENST00000352393 LRRC15Q8TF66 581 aa27.51■■□□□ 1.99
CPNE1-202ENST00000352393 ROBO3Q96MS0 1386 aa27.51■■□□□ 1.99
CPNE1-202ENST00000352393 TFAP4Q01664 338 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 SLC10A5Q5PT55 438 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 RASSF8Q8NHQ8 419 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 MCM9Q9NXL9 1143 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 MAD2L2Q9UI95 211 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 SPATA31A1Q5TZJ5 1347 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 LAD1O00515 517 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 N4BP1O75113 896 aaKnown RBP27.5■■□□□ 1.99
CPNE1-202ENST00000352393 USP17L8P0C7I0 530 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 PRPHP41219 470 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 UBA7P41226 1012 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 RAD51AP2Q09MP3 1159 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 PAPD7Q5XG87 772 aaKnown RBP27.5■■□□□ 1.99
CPNE1-202ENST00000352393 GALNT17Q6IS24 598 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 GOLGA5Q8TBA6 731 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 DUSP9Q99956 384 aaKnown RBP27.5■■□□□ 1.99
CPNE1-202ENST00000352393 TFCP2L1Q9NZI6 479 aa27.5■■□□□ 1.99
CPNE1-202ENST00000352393 MAGEC2Q9UBF1 373 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-202ENST00000352393 FLT1P17948 1338 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 GNAQP50148 359 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 INF2Q27J81 1249 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 DHTKD1Q96HY7 919 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-202ENST00000352393 MAGEF1Q9HAY2 307 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 MKRN1Q9UHC7 482 aaKnown RBP27.49■■□□□ 1.99
CPNE1-202ENST00000352393 COL24A1Q17RW2 1714 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 NAV1Q8NEY1 1877 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 ATP1A1P05023 1023 aaKnown RBP27.49■■□□□ 1.99
CPNE1-202ENST00000352393 USP14P54578 494 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 TSR1Q2NL82 804 aaKnown RBP27.49■■□□□ 1.99
CPNE1-202ENST00000352393 C12orf60Q5U649 245 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 HDAC6Q9UBN7 1215 aa27.49■■□□□ 1.99
CPNE1-202ENST00000352393 B4DLN1 442 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 STXBP3O00186 592 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 KRT83P78385 493 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 CCDC122Q5T0U0 273 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 CUEDC2Q9H467 287 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 EXOC1Q9NV70 894 aa27.48■■□□□ 1.99
CPNE1-202ENST00000352393 PES1O00541 588 aaKnown RBP27.47■■□□□ 1.99
CPNE1-202ENST00000352393 EHBP1Q8NDI1 1231 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 FAM71BQ8TC56 605 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 BARHL2Q9NY43 387 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 FAN1Q9Y2M0 1017 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 SBF2Q86WG5 1849 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 RASSF10A6NK89 507 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 LRRIQ3A6PVS8 624 aaPredicted RBP27.47■■□□□ 1.99
CPNE1-202ENST00000352393 ENC1O14682 589 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 ZBTB22O15209 634 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 CYTH3O43739 400 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 RPS8P62241 208 aaKnown RBP27.47■■□□□ 1.99
CPNE1-202ENST00000352393 RETREG2Q8NC44 543 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 TUBGCP2Q9BSJ2 902 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 TFR2Q9UP52 801 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
CPNE1-202ENST00000352393 SAR1BQ9Y6B6 198 aa27.47■■□□□ 1.99
CPNE1-202ENST00000352393 CAPN2P17655 700 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 SLC4A8Q2Y0W8 1093 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 CSGALNACT2Q8N6G5 542 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 JAKMIP2Q96AA8 810 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 PLIN2Q99541 437 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 NUP58Q9BVL2 599 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 ANKRD2Q9GZV1 360 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 ACTN2P35609 894 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 HEATR3Q7Z4Q2 680 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 MMS19Q96T76 1030 aa27.46■■□□□ 1.99
CPNE1-202ENST00000352393 CCNE1P24864 410 aa27.45■■□□□ 1.98
CPNE1-202ENST00000352393 CYLC1P35663 651 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-202ENST00000352393 SMARCC1Q92922 1105 aaPredicted RBP27.45■■□□□ 1.98
CPNE1-202ENST00000352393 P2RX5Q93086 422 aa27.45■■□□□ 1.98
CPNE1-202ENST00000352393 VIPAS39Q9H9C1 493 aa27.45■■□□□ 1.98
CPNE1-202ENST00000352393 AGPAT5Q9NUQ2 364 aa27.45■■□□□ 1.98
CPNE1-202ENST00000352393 IRS2Q9Y4H2 1338 aa27.45■■□□□ 1.98
CPNE1-202ENST00000352393 EIF3CLB5ME19 914 aaKnown RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms