RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TRIM34Q9BYJ4 488 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 SERPINA10Q9UK55 444 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
MBD1-203ENST00000339998 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 RASSF8Q8NHQ8 419 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 C6orf50Q9HD87 102 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 SERPINC1P01008 464 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 GH2P01242 217 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.54■□□□□ 0.4
MBD1-203ENST00000339998 SH3RF1Q7Z6J0 888 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
MBD1-203ENST00000339998 LRRC8AQ8IWT6 810 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 VEZTQ9HBM0 779 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 NFE2L3Q9Y4A8 694 aa17.54■□□□□ 0.4
MBD1-203ENST00000339998 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 TDP2O95551 362 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 BMP15O95972 392 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 NT5DC1Q5TFE4 455 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
MBD1-203ENST00000339998 REXO1Q8N1G1 1221 aaKnown RBP17.53■□□□□ 0.4
MBD1-203ENST00000339998 DAGLBQ8NCG7 672 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 TECP42680 631 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 DHX8Q14562 1220 aaKnown RBP17.53■□□□□ 0.4
MBD1-203ENST00000339998 NONOQ15233 471 aaKnown RBP eCLIP17.53■□□□□ 0.4
MBD1-203ENST00000339998 ASPRV1Q53RT3 343 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 PDXDC2PQ6P474 469 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 MIGA2Q7L4E1 593 aa17.53■□□□□ 0.4
MBD1-203ENST00000339998 HOOK1Q9UJC3 728 aaKnown RBP17.53■□□□□ 0.4
MBD1-203ENST00000339998 ZNF646O15015 1829 aaPredicted RBP17.53■□□□□ 0.4
MBD1-203ENST00000339998 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 SLC1A4P43007 532 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 TNNI2P48788 182 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 NAALADL2Q58DX5 795 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 SPATA20Q8TB22 786 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 IKBKBO14920 756 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 SLC37A4O43826 429 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 UBASH3AP57075 661 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 ICA1Q05084 483 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 INTS13Q9NVM9 706 aa17.52■□□□□ 0.4
MBD1-203ENST00000339998 A0A1W2PRG0 241 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 GNA11P29992 359 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 TXKP42681 527 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 ECE1P42892 770 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 NT5C2P49902 561 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 SLFN13Q68D06 897 aa17.52■□□□□ 0.39
MBD1-203ENST00000339998 CDC25BP30305 580 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 ABCB5Q2M3G0 1257 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
MBD1-203ENST00000339998 NEK8Q86SG6 692 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 EHD4Q9H223 541 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
MBD1-203ENST00000339998 STAT6P42226 847 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.51■□□□□ 0.39
MBD1-203ENST00000339998 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 GDAQ9Y2T3 454 aa17.51■□□□□ 0.39
MBD1-203ENST00000339998 ZYXQ15942 572 aaKnown RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 ARMCX5Q6P1M9 558 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 EEF2KMTQ96G04 330 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 C10orf71Q711Q0 1435 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 F5H6K3 240 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 NEMFO60524 1076 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 EGFRP00533 1210 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 ADCY7P51828 1080 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 KLRC3Q07444 240 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 USH1GQ495M9 461 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 RBM26Q5T8P6 1007 aaKnown RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 KRT25Q7Z3Z0 450 aa17.5■□□□□ 0.39
MBD1-203ENST00000339998 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 TRMT1Q9NXH9 659 aaKnown RBP17.5■□□□□ 0.39
MBD1-203ENST00000339998 PNMA6FA0A0J9YX94 578 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 SKILP12757 684 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 UBA7P41226 1012 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
MBD1-203ENST00000339998 TATDN1Q6P1N9 297 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 CREBRFQ8IUR6 639 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 TSC1Q92574 1164 aa17.49■□□□□ 0.39
MBD1-203ENST00000339998 C16orf45Q96MC5 204 aaPredicted RBP17.49■□□□□ 0.39
MBD1-203ENST00000339998 MRIQ9BWK5 157 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms