RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ORC4O43929 436 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 AMPD2Q01433 879 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 SPAG1Q07617 926 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 CCDC102AQ96A19 550 aa19.51■□□□□ 0.71
PTP4A3-201ENST00000329397 RCCD1A6NED2 376 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 CYTH3O43739 400 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 RAD51AP2Q09MP3 1159 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 ZSCAN26Q16670 478 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 TBC1D9BQ66K14 1250 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 DTHD1Q6ZMT9 781 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 HDXQ7Z353 690 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 GSPT2Q8IYD1 628 aaKnown RBP19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 STX8Q9UNK0 236 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 LUC7L2Q9Y383 392 aaKnown RBP19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 LRRIQ3A6PVS8 624 aaPredicted RBP19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 UBA7P41226 1012 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 MMP14P50281 582 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 CYP27A1Q02318 531 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 CASP8Q14790 479 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 CCDC122Q5T0U0 273 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 PCDHA4Q9UN74 947 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 DLEC1Q9Y238 1755 aa19.5■□□□□ 0.71
PTP4A3-201ENST00000329397 KLRC4O43908 158 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 CCDC178Q5BJE1 867 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 FBXO33Q7Z6M2 555 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 TXLNBQ8N3L3 684 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 OR8K1Q8NGG5 319 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 MMS19Q96T76 1030 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 LACRTQ9GZZ8 138 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 RMND1Q9NWS8 449 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 ZNF185O15231 689 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 HIBADHP31937 336 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 LONP1P36776 959 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 TRAPPC10P48553 1259 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 GRIK5Q16478 980 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 PCDHA6Q9UN73 950 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 PCDHA8Q9Y5H6 950 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 LGALS16A8MUM7 142 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 FCER1AP12319 257 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 PCMTD1Q96MG8 357 aaPredicted RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 ZNF652Q9Y2D9 606 aa19.49■□□□□ 0.71
PTP4A3-201ENST00000329397 KIF5BP33176 963 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 USP5P45974 858 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 MRPS25P82663 173 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 GPS2Q13227 327 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 FAM43BQ6ZT52 329 aaPredicted RBP19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 LCMT1Q9UIC8 334 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 MACROD2A1Z1Q3 448 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 H7C1D1 291 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 TRIM21P19474 475 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 WHAMMP3Q1A5X7 153 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 LINC00116Q8NCU8 138 aa19.48■□□□□ 0.71
PTP4A3-201ENST00000329397 ERLIN1O75477 346 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 PLCG1P19174 1290 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 ARL6IP4Q66PJ3 421 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 PTF1AQ7RTS3 328 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 KIAA1328Q86T90 577 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 CSGALNACT2Q8N6G5 542 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 ZNF507Q8TCN5 953 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 SH3RF3Q8TEJ3 882 aaPredicted RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 SMCR8Q8TEV9 937 aaPredicted RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 HNRNPLLQ8WVV9 542 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 RASSF10A6NK89 507 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 CLGNO14967 610 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 CALML3P27482 149 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 RPS8P62241 208 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 FOXR1Q6PIV2 292 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 KRT26Q7Z3Y9 468 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 MKNK2Q9HBH9 465 aa19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 ARPP21Q9UBL0 812 aaPredicted RBP19.47■□□□□ 0.71
PTP4A3-201ENST00000329397 PLEKP08567 350 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 STK4Q13043 487 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 TTI2Q6NXR4 508 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 RIN2Q8WYP3 895 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 DUSP9Q99956 384 aaKnown RBP19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 TUBGCP2Q9BSJ2 902 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 CASZ1Q86V15 1759 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 MYH10P35580 1976 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 TRIM14Q14142 442 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 DRC1Q96MC2 740 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 VAT1LQ9HCJ6 419 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 ATP8A2Q9NTI2 1148 aa19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 MAGEC2Q9UBF1 373 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-201ENST00000329397 PSMA7O14818 248 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 PSEN1P49768 467 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 ANKRD40Q6AI12 368 aa19.45■□□□□ 0.7
PTP4A3-201ENST00000329397 TRAPPC11Q7Z392 1133 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms