RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TTI2Q6NXR4 508 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 WDR93Q6P2C0 686 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 WDR59Q6PJI9 974 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 TRAPPC11Q7Z392 1133 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 GIMAP8Q8ND71 665 aaPredicted RBP9.79□□□□□ -0.84
CLK1-201ENST00000321356 NEK11Q8NG66 645 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 GPKOWQ92917 476 aaPredicted RBP eCLIP9.79□□□□□ -0.842e-12■□□□□ 8.8
CLK1-201ENST00000321356 TTYH3Q9C0H2 523 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 TMEM60Q9H2L4 133 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 KAT14Q9H8E8 782 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 IL17RBQ9NRM6 502 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 ADAM21Q9UKJ8 722 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
CLK1-201ENST00000321356 IRS2Q9Y4H2 1338 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 SRGNP10124 158 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 HERVK_113P62684 666 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 C12orf60Q5U649 245 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 DTHD1Q6ZMT9 781 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 STAG2Q8N3U4 1231 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 NOA1Q8NC60 698 aaKnown RBP9.78□□□□□ -0.84
CLK1-201ENST00000321356 PNMA1Q8ND90 353 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 NOC3LQ8WTT2 800 aaKnown RBP9.78□□□□□ -0.84
CLK1-201ENST00000321356 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
CLK1-201ENST00000321356 ANKRD2Q9GZV1 360 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 GBP3Q9H0R5 595 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 MAGEF1Q9HAY2 307 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 PDE11AQ9HCR9 933 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 MAD2L2Q9UI95 211 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 PCDHA6Q9UN73 950 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 LUC7L2Q9Y383 392 aaKnown RBP9.78□□□□□ -0.84
CLK1-201ENST00000321356 PCDHA8Q9Y5H6 950 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 FLT1P17948 1338 aa9.78□□□□□ -0.84
CLK1-201ENST00000321356 SBF2Q86WG5 1849 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 PP2D1A8MPX8 630 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 PSMA7O14818 248 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.85
CLK1-201ENST00000321356 GNAQP50148 359 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 DNM2P50570 870 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 RPS8P62241 208 aaKnown RBP9.77□□□□□ -0.85
CLK1-201ENST00000321356 STIM1Q13586 685 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 PAPD7Q5XG87 772 aaKnown RBP9.77□□□□□ -0.85
CLK1-201ENST00000321356 RASGRP4Q8TDF6 673 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 DHTKD1Q96HY7 919 aaPredicted RBP9.77□□□□□ -0.85
CLK1-201ENST00000321356 DUSP9Q99956 384 aaKnown RBP9.77□□□□□ -0.85
CLK1-201ENST00000321356 CUEDC2Q9H467 287 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 BARHL2Q9NY43 387 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 TRIM10Q9UDY6 481 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 NAV1Q8NEY1 1877 aa9.77□□□□□ -0.85
CLK1-201ENST00000321356 STXBP3O00186 592 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 CYTH3O43739 400 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 EIF3JO75822 258 aaKnown RBP9.76□□□□□ -0.85
CLK1-201ENST00000321356 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 RHOXF2BP0C7M4 288 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 UBA7P41226 1012 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 TFAP4Q01664 338 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 MCM6Q14566 821 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 CCDC178Q5BJE1 867 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 NCAPH2Q6IBW4 605 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 RETREG2Q8NC44 543 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 CCDC148Q8NFR7 591 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 RHOXF2Q9BQY4 288 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 SUGCTQ9HAC7 445 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 MCM9Q9NXL9 1143 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 PALM3A6NDB9 673 aaPredicted RBP9.76□□□□□ -0.85
CLK1-201ENST00000321356 RASSF10A6NK89 507 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 GYS2P54840 703 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 CASP8Q14790 479 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 INF2Q27J81 1249 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 SPTY2D1Q68D10 685 aaPredicted RBP9.76□□□□□ -0.85
CLK1-201ENST00000321356 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 TRIM47Q96LD4 638 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 AK8Q96MA6 479 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 GUCA1BQ9UMX6 200 aa9.76□□□□□ -0.85
CLK1-201ENST00000321356 DDX60LQ5H9U9 1706 aaKnown RBP9.76□□□□□ -0.85
CLK1-201ENST00000321356 CDK5RAP2Q96SN8 1893 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 A0A0G2JS52 829 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 CCNE1P24864 410 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 USP14P54578 494 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 KRT83P78385 493 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 CDK17Q00537 523 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 ZSCAN26Q16670 478 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 COBLL1Q53SF7 1204 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 FIGNQ5HY92 759 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 TBC1D9BQ66K14 1250 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 ZSCAN29Q8IWY8 852 aaPredicted RBP9.75□□□□□ -0.85
CLK1-201ENST00000321356 CCDC170Q8IYT3 715 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 RPGRIP1Q96KN7 1286 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
CLK1-201ENST00000321356 TUBGCP2Q9BSJ2 902 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 NUP58Q9BVL2 599 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 TRIM9Q9C026 710 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 VIPAS39Q9H9C1 493 aa9.75□□□□□ -0.85
CLK1-201ENST00000321356 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms