RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PKN1Q16512 942 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 CEP135Q66GS9 1140 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 TATDN1Q6P1N9 297 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 FAM83AQ86UY5 434 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 FAM151AQ8WW52 585 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 CEP95Q96GE4 821 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 CCDC17Q96LX7 622 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 TMEM47Q9BQJ4 181 aa16.13■□□□□ 0.17
VRK3-201ENST00000316763 V9GY48 417 aaPredicted RBP16.13■□□□□ 0.17
VRK3-201ENST00000316763 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 UBASH3AP57075 661 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 SPECC1Q5M775 1068 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 TRIML1Q8N9V2 468 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 MTMR4Q9NYA4 1195 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
VRK3-201ENST00000316763 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 KCNJ6P48051 423 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 CCAR2Q8N163 923 aaKnown RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 ZC3H15Q8WU90 426 aaKnown RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 SERTAD1Q9UHV2 236 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 STX8Q9UNK0 236 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 CTIFO43310 598 aaKnown RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 PLEKHA8P1O95397 391 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 YY1P25490 414 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 NT5DC1Q5TFE4 455 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 APOBEC3FQ8IUX4 373 aaKnown RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 GPBP1L1Q9HC44 474 aaPredicted RBP16.11■□□□□ 0.17
VRK3-201ENST00000316763 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 PITPNM2Q9BZ72 1349 aa16.11■□□□□ 0.17
VRK3-201ENST00000316763 TOP1P11387 765 aaKnown RBP16.1■□□□□ 0.17
VRK3-201ENST00000316763 TNFAIP1Q13829 316 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 RASA3Q14644 834 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 SYCP1Q15431 976 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 CSRNP2Q9H175 543 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
VRK3-201ENST00000316763 MAN1B1Q9UKM7 699 aa16.1■□□□□ 0.17
VRK3-201ENST00000316763 CCP110O43303 1012 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 KIF5BP33176 963 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 TNNI2P48788 182 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 GRIN1Q05586 938 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 GRM4Q14833 912 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 HSD3B7Q9H2F3 369 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 FAM196BA6NMK8 535 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 ATP1A3P13637 1013 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 SARSP49591 514 aaKnown RBP16.09■□□□□ 0.17
VRK3-201ENST00000316763 CERKLQ49MI3 558 aaPredicted RBP16.09■□□□□ 0.17
VRK3-201ENST00000316763 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 TSC1Q92574 1164 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 ZNF592Q92610 1267 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
VRK3-201ENST00000316763 CNTNAP5Q8WYK1 1306 aa16.09■□□□□ 0.17
VRK3-201ENST00000316763 FOXN1O15353 648 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
VRK3-201ENST00000316763 TTLL1O95922 423 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 TUBB4AP04350 444 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 MORC3Q14149 939 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.16
VRK3-201ENST00000316763 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 DLK2Q6UY11 383 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
VRK3-201ENST00000316763 FANCLQ9NW38 375 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.16
VRK3-201ENST00000316763 MAD2L2Q9UI95 211 aa16.08■□□□□ 0.16
VRK3-201ENST00000316763 USP27XA6NNY8 438 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 TBC1D12O60347 775 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 PRAMEF18Q5VWM3 479 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 KRT26Q7Z3Y9 468 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 SULF1Q8IWU6 871 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 PDILTQ8N807 584 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
VRK3-201ENST00000316763 TEPSINQ96N21 525 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 hCG_1642624A0A1W2PR95 340 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
VRK3-201ENST00000316763 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 SCG2P13521 617 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
VRK3-201ENST00000316763 TRAPPC10P48553 1259 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 GNAQP50148 359 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 TTC38Q5R3I4 469 aa16.07■□□□□ 0.16
VRK3-201ENST00000316763 MAP1SQ66K74 1059 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1525.5 ms