RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 SHISA4Q96DD7 197 aa6.61□□□□□ -1.35
PATL1-201ENST00000300146 RTEL1Q9NZ71 1219 aa6.61□□□□□ -1.35
PATL1-201ENST00000300146 RBM8AQ9Y5S9 174 aaKnown RBP6.61□□□□□ -1.35
PATL1-201ENST00000300146 FOXP2O15409 715 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 SBK1Q52WX2 424 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 TINF2Q9BSI4 451 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 ZCCHC17Q9NP64 241 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 CTNNA3Q9UI47 895 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 GNRH1P01148 92 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 TOP1P11387 765 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 PRMT2P55345 433 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 STK3Q13188 491 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 SYDE2Q5VT97 1194 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 PRPF38BQ5VTL8 546 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 CXCL17Q6UXB2 119 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 UBE2OQ9C0C9 1292 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 MORF4L1Q9UBU8 362 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 BAZ2AQ9UIF9 1905 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 SLC15A5A6NIM6 579 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 PARP1P09874 1014 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 RCSD1Q6JBY9 416 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 Q7L0L9 218 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 TRPV1Q8NER1 839 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 COPS5Q92905 334 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 LRCH3Q96II8 777 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 CFHR5Q9BXR6 569 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 C11orf49Q9H6J7 331 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 SPC25Q9HBM1 224 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 RBM27Q9P2N5 1060 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 ZNF214Q9UL59 606 aaPredicted RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 U3KPZ7 1027 aaPredicted RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 ZSWIM8A7E2V4 1837 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 CYP21A2P08686 494 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 WTAPQ15007 396 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 CCDC144BQ3MJ40 725 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 CYB5R4Q7L1T6 521 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 METTL16Q86W50 562 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
PATL1-201ENST00000300146 FEM1BQ9UK73 627 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 NOD1Q9Y239 953 aa6.6□□□□□ -1.35
PATL1-201ENST00000300146 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 CCDC69A6NI79 296 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 MYL3P08590 195 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 CCL23P55773 120 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 PSMC6P62333 389 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 SART3Q15020 963 aaKnown RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 ZSCAN10Q96SZ4 725 aaPredicted RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 MROH8Q9H579 483 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 ACAD9Q9H845 621 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 DDX20Q9UHI6 824 aaKnown RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 NCOR1O75376 2440 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 SMCHD1A6NHR9 2005 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 ADGRA2Q96PE1 1338 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 ZBBXA8MT70 800 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 KLRF2D3W0D1 207 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 HIP1O00291 1037 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 TULP1O00294 542 aaPredicted RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 ACRP10323 421 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 TLE2Q04725 743 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 LRRC26Q2I0M4 334 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 ARMCX2Q7L311 632 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 ENAHQ8N8S7 591 aaPredicted RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 PXYLP1Q8TE99 480 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 STAG1Q8WVM7 1258 aa6.59□□□□□ -1.35
PATL1-201ENST00000300146 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.59□□□□□ -1.35
PATL1-201ENST00000300146 STRNO43815 780 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 RAG1P15918 1043 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 PDE4DQ08499 809 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 FAM117BQ6P1L5 589 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 MB21D1Q8N884 522 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.36
PATL1-201ENST00000300146 STARD7Q9NQZ5 370 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 SLC45A1Q9Y2W3 748 aa6.59□□□□□ -1.36
PATL1-201ENST00000300146 MYADML2A6NDP7 307 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 SLC25A27O95847 323 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 CCT2P78371 535 aaKnown RBP6.58□□□□□ -1.36
PATL1-201ENST00000300146 CDC37Q16543 378 aaPredicted RBP6.58□□□□□ -1.36
PATL1-201ENST00000300146 TRIM60Q495X7 471 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 MORN1Q5T089 497 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 SYNE3Q6ZMZ3 975 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 RNF207Q6ZRF8 634 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 SH3RF1Q7Z6J0 888 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 MICALL1Q8N3F8 863 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 PGBD1Q96JS3 809 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 C12orf42Q96LP6 360 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 PIGSQ96S52 555 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 ALG1Q9BT22 464 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 AP5M1Q9H0R1 490 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 TMEM39AQ9NV64 488 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 CDH23Q9H251 3354 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 E7EWF7 191 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 PRC1O43663 620 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 PDHBP11177 359 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 RPS6P62753 249 aaKnown RBP6.58□□□□□ -1.36
PATL1-201ENST00000300146 ACVR2BQ13705 512 aa6.58□□□□□ -1.36
PATL1-201ENST00000300146 DEFB128Q7Z7B8 93 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms