RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 CYP2J2P51589 502 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 SCYL2Q6P3W7 929 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ZNF449Q6P9G9 518 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ST7Q9NRC1 585 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 NOP53Q9NZM5 478 aaKnown RBP16.23■□□□□ 0.19
SCN3B-201ENST00000299333 ANGPTL2Q9UKU9 493 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 PHLPP2Q6ZVD8 1323 aa16.23■□□□□ 0.19
SCN3B-201ENST00000299333 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 SUFUQ9UMX1 484 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 CDC25BP30305 580 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 G2E3Q7L622 706 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 BBOF1Q8ND07 529 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 GDAP1Q8TB36 358 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 INHBAP08476 426 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 TNNI1P19237 187 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 TADA2BQ86TJ2 420 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 SMYD2Q9NRG4 433 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 AOX1Q06278 1338 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 PIK3C2GO75747 1445 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 BFSP1Q12934 665 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 TMED2Q15363 201 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 FBXO38Q6PIJ6 1188 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 TRIML2Q8N7C3 387 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 APPBP2Q92624 585 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 CYTH2Q99418 400 aa16.22■□□□□ 0.19
SCN3B-201ENST00000299333 WBP4O75554 376 aaKnown RBP16.21■□□□□ 0.19
SCN3B-201ENST00000299333 H2AFZP0C0S5 128 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 NDUFA8P51970 172 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
SCN3B-201ENST00000299333 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 H2AFVQ71UI9 128 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 CCDC159P0C7I6 412 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
SCN3B-201ENST00000299333 MTMR6Q9Y217 621 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 COBLO75128 1261 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 SPATA1Q5VX52 437 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 ARMC2Q8NEN0 867 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 NOVA2Q9UNW9 492 aaKnown RBP16.21■□□□□ 0.19
SCN3B-201ENST00000299333 PRAG1Q86YV5 1406 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 NR1D1P20393 614 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 PLTPP55058 493 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 ARHGEF18Q6ZSZ5 1173 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 DYDC2Q96IM9 177 aa16.21■□□□□ 0.19
SCN3B-201ENST00000299333 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.18
SCN3B-201ENST00000299333 CASP8Q14790 479 aa16.21■□□□□ 0.18
SCN3B-201ENST00000299333 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.18
SCN3B-201ENST00000299333 CCDC151A5D8V7 595 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 H7C1D1 291 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 RAP1GDS1P52306 607 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 TTC6Q86TZ1 520 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 MAGOHBQ96A72 148 aaKnown RBP16.2■□□□□ 0.18
SCN3B-201ENST00000299333 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 STK24Q9Y6E0 443 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 TADA3O75528 432 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 FBXO18Q8NFZ0 1043 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 CLIC6Q96NY7 704 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 TBK1Q9UHD2 729 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 E7EWF7 191 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 STAM2O75886 525 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 PNMA6AP0CW24 399 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-201ENST00000299333 PDE6BP35913 854 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 DYNC1I2Q13409 638 aaKnown RBP16.2■□□□□ 0.18
SCN3B-201ENST00000299333 SNX1Q13596 522 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 ABCB6Q9NP58 842 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 SCHIP1Q9P0W5 487 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-201ENST00000299333 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.2■□□□□ 0.18
SCN3B-201ENST00000299333 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 ORC6Q9Y5N6 252 aa16.2■□□□□ 0.18
SCN3B-201ENST00000299333 CMA1P23946 247 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 CXCR5P32302 372 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 GARSP41250 739 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 MSH2P43246 934 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 PDE1BQ01064 536 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 DHX9Q08211 1270 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 RBL2Q08999 1139 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 HADHQ16836 314 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 GRAMD1BQ3KR37 738 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 MCUQ8NE86 351 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 TDRD7Q8NHU6 1098 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 COPB1P53618 953 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 CNOT10Q9H9A5 744 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 EIF3CLB5ME19 914 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 PRPF6O94906 941 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 MYCLP12524 364 aaPredicted RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 ECE1P42892 770 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 KIAA2013Q8IYS2 634 aa16.19■□□□□ 0.18
SCN3B-201ENST00000299333 EIF3CQ99613 913 aaKnown RBP16.19■□□□□ 0.18
SCN3B-201ENST00000299333 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms