RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 TC2NQ8N9U0 490 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 STRCP1A6NGW2 1772 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 SLC35F6Q8N357 371 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 PKNOX2Q96KN3 472 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 APBA3O96018 575 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 FCER1AP12319 257 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 DPYDQ12882 1025 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 ANKRD13CQ8N6S4 541 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 INTS13Q9NVM9 706 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 PARP3Q9Y6F1 533 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 TRAF5O00463 557 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 NLRC4Q9NPP4 1024 aa13.29□□□□□ -0.28
SLC13A3-201ENST00000279027 PARP4Q9UKK3 1724 aaKnown RBP13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 TDP2O95551 362 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 SYCP1Q15431 976 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 CHMP2AO43633 222 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 GRM4Q14833 912 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 ZNF658Q5TYW1 1059 aaPredicted RBP13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 TBC1D16Q8TBP0 767 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 TRAPPC10P48553 1259 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 MAD2L2Q9UI95 211 aa13.28□□□□□ -0.28
SLC13A3-201ENST00000279027 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 PTPROQ16827 1216 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 RAD9BQ6WBX8 426 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 GOLGA1Q92805 767 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 CCDC42Q96M95 316 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 TSG101Q99816 390 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 MTA3Q9BTC8 594 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 CNTNAP4Q9C0A0 1308 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 TUBGCP6Q96RT7 1819 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 USP54Q70EL1 1684 aa13.27□□□□□ -0.28
SLC13A3-201ENST00000279027 USP17L15C9J2P7 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L13C9JLJ4 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L11C9JVI0 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L18D6R9N7 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L22D6RA61 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L19D6RCP7 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L20D6RJB6 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CYTH3O43739 400 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CLCN6P51797 869 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L24Q0WX57 530 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 PLS1Q14651 629 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 FLT1P17948 1338 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CTAGE15A4D2H0 777 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CTAGE8P0CG41 777 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 RCAN1P53805 252 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 RNASE9P60153 205 aaKnown RBP13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 TCP11X2Q5H9J9 407 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CCDC181Q5TID7 509 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CTAGE6Q86UF2 777 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 CHP1Q99653 195 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 TUBGCP2Q9BSJ2 902 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
SLC13A3-201ENST00000279027 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 UBXN2AP68543 259 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 GPS2Q13227 327 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 TEKT1Q969V4 418 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 FEZ1Q99689 392 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 BBOX1O75936 387 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 FUT2Q10981 343 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 NR1I3Q14994 352 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 SBK1Q52WX2 424 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
SLC13A3-201ENST00000279027 CNOT6LQ96LI5 555 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms