RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 BRD3Q15059 726 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 MYSM1Q5VVJ2 828 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 PPP1R9AQ9ULJ8 1098 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 LRRC8CQ8TDW0 803 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 MRFAP1Q9Y605 127 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 SGK1O00141 431 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 APOEP02649 317 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 MYLK4Q86YV6 388 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 REXO1Q8N1G1 1221 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 RIC8AQ9NPQ8 531 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 CAPN9O14815 690 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 SYMPKQ92797 1274 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 GJA10Q969M2 543 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 SCNN1DP51172 638 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 POLE2P56282 527 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
TSPAN3-201ENST00000267970 ZNF654Q8IZM8 581 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 RASGRP4Q8TDF6 673 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 SUGCTQ9HAC7 445 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 TSKSQ9UJT2 592 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 PCDHA7Q9UN72 937 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 PARD3Q8TEW0 1356 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 TMED2Q15363 201 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 CYP4F22Q6NT55 531 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 RBL2Q08999 1139 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 PHLDB3Q6NSJ2 640 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 H7C0C1 242 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 ATP5OP48047 213 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 PHEXP78562 749 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 EYA3Q99504 573 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 NUCKS1Q9H1E3 243 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 RRP15Q9Y3B9 282 aaKnown RBP18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 BTBD18B2RXH4 712 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 DEPTORQ8TB45 409 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 EPB41L5Q9HCM4 733 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 ATP8A1Q9Y2Q0 1164 aa18.4■□□□□ 0.54
TSPAN3-201ENST00000267970 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.54
TSPAN3-201ENST00000267970 PDE8AO60658 829 aa18.39■□□□□ 0.54
TSPAN3-201ENST00000267970 PPFIA2O75334 1257 aa18.39■□□□□ 0.54
TSPAN3-201ENST00000267970 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.54
TSPAN3-201ENST00000267970 PARP2Q9UGN5 583 aa18.39■□□□□ 0.54
TSPAN3-201ENST00000267970 USP17L12C9JPN9 530 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 USP17L21D6R901 530 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 BRD1O95696 1058 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 VCX3AQ9NNX9 186 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 MOCS3O95396 460 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 GCP02774 474 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 RPN1P04843 607 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 IRX4P78413 519 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 PRPF31Q8WWY3 499 aaKnown RBP18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 P3H4Q92791 437 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 SLC4A7Q9Y6M7 1214 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 PHBP35232 272 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 ADALQ6DHV7 355 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 CDAN1Q8IWY9 1227 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 ACRBPQ8NEB7 543 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 PPP1R16BQ96T49 567 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 FTCDO95954 541 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
TSPAN3-201ENST00000267970 GYG1P46976 350 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 LIG4P49917 911 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 BFSP1Q12934 665 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 PPWD1Q96BP3 646 aaKnown RBP18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 LRGUKQ96M69 825 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 LRRD1A4D1F6 860 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 EFCAB8A8MWE9 144 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 GNL1P36915 607 aaPredicted RBP18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 PDE6CP51160 858 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 TMEM259Q4ZIN3 620 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 XKR9Q5GH70 373 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 FLT4P35916 1363 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 LRRN2O75325 713 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 ARHGEF16Q5VV41 709 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 RFX6Q8HWS3 928 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 HOMER3Q9NSC5 361 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 KCNQ3O43525 872 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 ZBED4O75132 1171 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 ALAS1P13196 640 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 SEPT8Q92599 483 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 NUB1Q9Y5A7 615 aa18.38■□□□□ 0.53
TSPAN3-201ENST00000267970 SOWAHDA6NJG2 315 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 ABCC1P33527 1531 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 ZBTB41Q5SVQ8 909 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 HIPK4Q8NE63 616 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 ADAM9Q13443 819 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 TRIM56Q9BRZ2 755 aaKnown RBP18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
TSPAN3-201ENST00000267970 CACYBPQ9HB71 228 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms