RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ATP6V0A4Q9HBG4 840 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 GGA2Q9UJY4 613 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 ZNF831Q5JPB2 1677 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 RREB1Q92766 1687 aa14.64□□□□□ -0.07
NUP54-201ENST00000264883 IRF6O14896 467 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 BMP15O95972 392 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 KDM7AQ6ZMT4 941 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 FAM228AQ86W67 206 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 RNPC3Q96LT9 517 aaKnown RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 SLC26A6Q9BXS9 759 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 ACTR5Q9H9F9 607 aaPredicted RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 RNF225M0QZC1 329 aaPredicted RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 PDE2AO00408 941 aaPredicted RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 ZNF185O15231 689 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 KCNQ2O43526 872 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 DEXIO95424 95 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 SSBP05455 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
NUP54-201ENST00000264883 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 GUCY1A3Q02108 690 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 NNTQ13423 1086 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 E2F5Q15329 346 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 PTGISQ16647 500 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 CCDC122Q5T0U0 273 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 KCTD16Q68DU8 428 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 NLRP14Q86W24 1093 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 DIS3L2Q8IYB7 885 aaKnown RBP14.63□□□□□ -0.07
NUP54-201ENST00000264883 TMTC2Q8N394 836 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 ARMC2Q8NEN0 867 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 ZBTB3Q9H5J0 574 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 AKAP11Q9UKA4 1901 aa14.63□□□□□ -0.07
NUP54-201ENST00000264883 B4E1Z4 1266 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 ACTN4O43707 911 aaKnown RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 ONECUT3O60422 494 aaPredicted RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 CDC25AP30304 524 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 GBP2P32456 591 aaPredicted RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 KRT9P35527 623 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 CCT6AP40227 531 aaKnown RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 TRIM14Q14142 442 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 PPP2R5BQ15173 497 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 CCDC121Q6ZUS5 278 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 KIRREL3Q8IZU9 778 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 FUKQ8N0W3 1084 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 TSEN2Q8NCE0 465 aaKnown RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 AIDAQ96BJ3 306 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 CCT8L2Q96SF2 557 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 CHP1Q99653 195 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 SEC31BQ9NQW1 1179 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 PPP1R37O75864 691 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 SLC8A1P32418 973 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 MCAMP43121 646 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 EPHB4P54760 987 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 HDLBPQ00341 1268 aaKnown RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 METTL24Q5JXM2 366 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 ZNF483Q8TF39 744 aaPredicted RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 RUBCNQ92622 972 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
NUP54-201ENST00000264883 TPX2Q9ULW0 747 aaKnown RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 IQSEC3Q9UPP2 1182 aaPredicted RBP14.62□□□□□ -0.07
NUP54-201ENST00000264883 ZBTB1Q9Y2K1 713 aa14.62□□□□□ -0.07
NUP54-201ENST00000264883 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 TOB1P50616 345 aaPredicted RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 SIK1P57059 783 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 ZBTB38Q8NAP3 1195 aaPredicted RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 EHBP1Q8NDI1 1231 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 IFIT3O14879 490 aaKnown RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 N4BP3O15049 544 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 RPSAP08865 295 aaKnown RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 GCKP35557 465 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 SEC24CP53992 1094 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 SLC8A3P57103 927 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 CUL4BQ13620 913 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 EZH2Q15910 746 aaKnown RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 EMBQ6PCB8 327 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 C6orf89Q6UWU4 347 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 MMGT1Q8N4V1 131 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 HDAC7Q8WUI4 952 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 ZIM3Q96PE6 472 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 GSDMAQ96QA5 445 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 PYM1Q9BRP8 204 aaKnown RBP14.61□□□□□ -0.07
NUP54-201ENST00000264883 TFR2Q9UP52 801 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 RIPOR2Q9Y4F9 1068 aa14.61□□□□□ -0.07
NUP54-201ENST00000264883 CHD4Q14839 1912 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 SKAP2O75563 359 aaPredicted RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 FAM107AO95990 144 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 COL5A3P25940 1745 aaPredicted RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 IL6STP40189 918 aaPredicted RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 SPAG1Q07617 926 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 RTN1Q16799 776 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 STRBPQ96SI9 672 aaKnown RBP14.6□□□□□ -0.07
NUP54-201ENST00000264883 LRRC1Q9BTT6 524 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 POLD4Q9HCU8 107 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 JADE2Q9NQC1 790 aa14.6□□□□□ -0.07
NUP54-201ENST00000264883 SPATS2LQ9NUQ6 558 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms