RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ITGA6P23229 1130 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
XRCC1-201ENST00000262887 PPARAQ07869 468 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 PKN1Q16512 942 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 TTLL11Q8NHH1 800 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 ZNF507Q8TCN5 953 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 AGPAT5Q9NUQ2 364 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
XRCC1-201ENST00000262887 MYH6P13533 1939 aa16.7■□□□□ 0.26
XRCC1-201ENST00000262887 PRKAB2O43741 272 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 ZEB2O60315 1214 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 PCCAP05165 728 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 ATP1A2P50993 1020 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 SLC7A5Q01650 507 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 ZNF572Q7Z3I7 529 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 CCDC170Q8IYT3 715 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 GIMAP7Q8NHV1 300 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 UQCRFS1P1P0C7P4 283 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 MAP3K12Q12852 859 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 LRCH2Q5VUJ6 765 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 YTHDF3Q7Z739 585 aaKnown RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 SPATA4Q8NEY3 305 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 PLA2G12BQ9BX93 195 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 B4DLN1 442 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 CHUKO15111 745 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 DNM2P50570 870 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
XRCC1-201ENST00000262887 NNTQ13423 1086 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 TRIM58Q8NG06 486 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 CAVIN3Q969G5 261 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 TRIM47Q96LD4 638 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 MTA3Q9BTC8 594 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 TSGA10Q9BZW7 698 aa16.69■□□□□ 0.26
XRCC1-201ENST00000262887 PPP1R12AO14974 1030 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 VAV2P52735 878 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 CCDC96Q2M329 555 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 KCTD16Q68DU8 428 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 ADSSL1Q8N142 457 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 SH2D3CQ8N5H7 860 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 ZKSCAN4Q969J2 545 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 ZIM3Q96PE6 472 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 EPN3Q9H201 632 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 GREM2Q9H772 168 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 CD248Q9HCU0 757 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 STIM2Q9P246 746 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 SLC4A4Q9Y6R1 1079 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 TNKSO95271 1327 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 LSP1P33241 339 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 NAA35Q5VZE5 725 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 KDM7AQ6ZMT4 941 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
XRCC1-201ENST00000262887 LRWD1Q9UFC0 647 aa16.68■□□□□ 0.26
XRCC1-201ENST00000262887 RTL9Q8NET4 1388 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 PDE8BO95263 885 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 NEDD9Q14511 834 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 SPA17Q15506 151 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 PCMTD1Q96MG8 357 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 TTYH3Q9C0H2 523 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 THAP9Q9H5L6 903 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 EXOC1Q9NV70 894 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 ANKRD18BA2A2Z9 1011 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 C21orf2O43822 256 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 TACC1O75410 805 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 SRGNP10124 158 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 RNF187Q5TA31 235 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 CCDC181Q5TID7 509 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 PROSER2Q86WR7 435 aaPredicted RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 SYNE4Q8N205 404 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
XRCC1-201ENST00000262887 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
XRCC1-201ENST00000262887 PRPF3O43395 683 aaKnown RBP16.66■□□□□ 0.26
XRCC1-201ENST00000262887 PRLRP16471 622 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 MCM7P33993 719 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 ZBED6P86452 979 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 LCORLQ8N3X6 602 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 VCPKMTQ9H867 229 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 CAPN6Q9Y6Q1 641 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 USO1O60763 962 aaKnown RBP16.66■□□□□ 0.26
XRCC1-201ENST00000262887 KRT14P02533 472 aa16.66■□□□□ 0.26
XRCC1-201ENST00000262887 TNFRSF8P28908 595 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms