RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 CHRNA5P30532 468 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 ALDH3A1P30838 453 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 STAT2P52630 851 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 TFAMQ00059 246 aaKnown RBP17.43■□□□□ 0.38
SHANK3-201ENST00000262795 TTBK2Q6IQ55 1244 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 SYNDIG1LA6NDD5 238 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 PDE6AP16499 860 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 RPS6KA2Q15349 733 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 YIPF2Q9BWQ6 316 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-201ENST00000262795 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
SHANK3-201ENST00000262795 KIF11P52732 1056 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 RMDN2Q96LZ7 410 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 MMTAG2Q9BU76 263 aaKnown RBP17.43■□□□□ 0.38
SHANK3-201ENST00000262795 LSM14BQ9BX40 385 aaKnown RBP17.43■□□□□ 0.38
SHANK3-201ENST00000262795 PANK4Q9NVE7 773 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 PCDHB4Q9Y5E5 795 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 LRCH2Q5VUJ6 765 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 NLRC4Q9NPP4 1024 aa17.43■□□□□ 0.38
SHANK3-201ENST00000262795 VAMP4O75379 141 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 HEXIM1O94992 359 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 KLHL40Q2TBA0 621 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 PNMA1Q8ND90 353 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 NXF1Q9UBU9 619 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 TSR3Q9UJK0 312 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 IFNB1P01574 187 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 USP17L8P0C7I0 530 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 PALM2Q8IXS6 379 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 PCIF1Q9H4Z3 704 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 ACCSLQ4AC99 568 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 CPSF2Q9P2I0 782 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 MEIS1O00470 390 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 HOXA13P31271 388 aaPredicted RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 SCN4BQ8IWT1 228 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 CTAGE3PQ8IX95 158 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 MCUQ8NE86 351 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 KCNJ6P48051 423 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 EPHB1P54762 984 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 ADAT2Q7Z6V5 191 aaKnown RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 AFAP1L2Q8N4X5 818 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 STMN4Q9H169 189 aaPredicted RBP17.42■□□□□ 0.38
SHANK3-201ENST00000262795 ATP8A2Q9NTI2 1148 aa17.42■□□□□ 0.38
SHANK3-201ENST00000262795 EIF2AK2P19525 551 aaKnown RBP17.41■□□□□ 0.38
SHANK3-201ENST00000262795 VPS41P49754 854 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 ANO4Q32M45 955 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 TAB2Q9NYJ8 693 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 COBLO75128 1261 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 SKILP12757 684 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 ADORA1P30542 326 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 BRAPQ7Z569 592 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 FAM178BQ8IXR5 827 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-201ENST00000262795 PPM1KQ8N3J5 372 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-201ENST00000262795 WDR48Q8TAF3 677 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 ANGPTL3Q9Y5C1 460 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 ABCC10Q5T3U5 1492 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 A6NJR5 290 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
SHANK3-201ENST00000262795 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SLC12A6Q9UHW9 1150 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 ZKSCAN5Q9Y2L8 839 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SYNRGQ9UMZ2 1314 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 ECE2O60344 883 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 PDCD6IPQ8WUM4 868 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 ARAP3Q8WWN8 1544 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 HNRNPDLO14979 420 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SEC24BO95487 1268 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SARNPP82979 210 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 GLYCTKQ8IVS8 523 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 AFG1LQ8WV93 481 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 FAM8A1Q9UBU6 413 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 TNPO2O14787 897 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 RILPL1Q5EBL4 403 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SZRD1Q7Z422 152 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 CERKQ8TCT0 537 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 RNF139Q8WU17 664 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 SLC38A10Q9HBR0 1119 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 BFSP1Q12934 665 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 MYSM1Q5VVJ2 828 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 KLHL7Q8IXQ5 586 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 OTUD7AQ8TE49 926 aaPredicted RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 VPS37BQ9H9H4 285 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 ERBB3P21860 1342 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 KBTBD13C9JR72 458 aa17.4■□□□□ 0.38
SHANK3-201ENST00000262795 XPOTO43592 962 aaKnown RBP17.4■□□□□ 0.38
SHANK3-201ENST00000262795 S100BP04271 92 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms