RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PPP1R12CQ9BZL4 782 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 A6NJR5 290 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 MORC3Q14149 939 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 KCTD2Q14681 263 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 FAM178BQ8IXR5 827 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 LMNTD2Q8IXW0 634 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 KCNJ12Q14500 433 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 IFNL3Q8IZI9 196 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 ERO1AQ96HE7 468 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 QTRT2Q9H974 415 aaKnown RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 RIC8AQ9NPQ8 531 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 GBP6Q6ZN66 633 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 GBP7Q8N8V2 638 aaPredicted RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 GOLGA5Q8TBA6 731 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
COL1A1-201ENST00000225964 BZW2Q9Y6E2 419 aaKnown RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
COL1A1-201ENST00000225964 SGSM2O43147 1006 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 UBXN2AP68543 259 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 CHRNDQ07001 517 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 SLFN13Q68D06 897 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 CSRNP1Q96S65 589 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 IMPACTQ9P2X3 320 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 BUB1O43683 1085 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 ECE1P42892 770 aa14.52□□□□□ -0.08
COL1A1-201ENST00000225964 ABT1Q9ULW3 272 aaKnown RBP14.52□□□□□ -0.08
COL1A1-201ENST00000225964 MAST1Q9Y2H9 1570 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 GOLGA8CPA6NN73 597 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 SLC4A1P02730 911 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 VPS41P49754 854 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 GUCY2FP51841 1108 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 CCNA1P78396 465 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 ANKRD36BP1Q96IX9 119 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 PIK3C2GO75747 1445 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 KCNK3O14649 394 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 PTPREP23469 700 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 CCDC84Q86UT8 332 aaPredicted RBP14.52□□□□□ -0.09
COL1A1-201ENST00000225964 PNMA1Q8ND90 353 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 CCDC127Q96BQ5 260 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 KLRF2D3W0D1 207 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 TRIM37O94972 964 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 PPM1KQ8N3J5 372 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 HDAC11Q96DB2 347 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 PCDHB4Q9Y5E5 795 aa14.52□□□□□ -0.09
COL1A1-201ENST00000225964 ARMC9Q7Z3E5 817 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 ADAT2Q7Z6V5 191 aaKnown RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 NEK8Q86SG6 692 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 SPICE1Q8N0Z3 855 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 DCLK2Q8N568 766 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 OR52Z1P0C646 297 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 TBC1D10BQ4KMP7 808 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 ANKRD20A3Q5VUR7 823 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 ADKP55263 362 aaKnown RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 EDC3Q96F86 508 aaKnown RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 SEC24BO95487 1268 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 CASP2P42575 452 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 MIS18BP1Q6P0N0 1132 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 RFX6Q8HWS3 928 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 MIS12Q9H081 205 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 TROVE2P10155 538 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 STX2P32856 288 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 GARSP41250 739 aaKnown RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 TMTC4Q5T4D3 741 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 ZBTB38Q8NAP3 1195 aaPredicted RBP14.51□□□□□ -0.09
COL1A1-201ENST00000225964 ZMYM6O95789 1325 aa14.51□□□□□ -0.09
COL1A1-201ENST00000225964 POLR2BP30876 1174 aaKnown RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 SNX25Q9H3E2 840 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 H7C0C1 242 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 ATP5OP48047 213 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 MYL7Q01449 175 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 JADE1Q6IE81 842 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 OGFRQ9NZT2 677 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 KRIT1O00522 736 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 ZSCAN20P17040 1043 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 KSR1Q8IVT5 923 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 HVCN1Q96D96 273 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 ANGPTL3Q9Y5C1 460 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 CCND2P30279 289 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 DACT3Q96B18 629 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 SMYD2Q9NRG4 433 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 STK38LQ9Y2H1 464 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 ARHGAP42A6NI28 874 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 RGS16O15492 202 aaPredicted RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 XPOTO43592 962 aaKnown RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 POLR2FP61218 127 aaKnown RBP14.5□□□□□ -0.09
COL1A1-201ENST00000225964 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 PI4K2BQ8TCG2 481 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 UBN1Q9NPG3 1134 aa14.5□□□□□ -0.09
COL1A1-201ENST00000225964 FAM114A2Q9NRY5 505 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms