RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 RFX6Q8HWS3 928 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 ABI1Q8IZP0 508 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 ANAPC5Q9UJX4 755 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 A6NJR5 290 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 USP17L12C9JPN9 530 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 USP17L21D6R901 530 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
KNOP1-201ENST00000219837 GSTA1P08263 222 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 GSTA2P09210 222 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 UBXN2AP68543 259 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PDZD4Q76G19 769 aaPredicted RBP12.18□□□□□ -0.46
KNOP1-201ENST00000219837 LMNTD2Q8IXW0 634 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 ANKRD36BP1Q96IX9 119 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PFDN6O15212 129 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 ADKP55263 362 aaKnown RBP12.18□□□□□ -0.46
KNOP1-201ENST00000219837 ARPP19P56211 112 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 MYL7Q01449 175 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 CHMP6Q96FZ7 201 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 VSIG1Q86XK7 387 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PCDHA12Q9UN75 941 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
KNOP1-201ENST00000219837 KIF3CO14782 793 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 CASP2P42575 452 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 ECE1P42892 770 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 ARHGAP24Q8N264 748 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 HOXB7P09629 217 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 RUFY4Q6ZNE9 571 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 KCNK3O14649 394 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 EIF4A1P60842 406 aaKnown RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 BZW2Q9Y6E2 419 aaKnown RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 STAT1P42224 750 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 GBP6Q6ZN66 633 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 STK38LQ9Y2H1 464 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 MCTP2Q6DN12 878 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 ADAT2Q7Z6V5 191 aaKnown RBP12.17□□□□□ -0.46
KNOP1-201ENST00000219837 CROCCP2Q86T23 111 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 HESX1Q9UBX0 185 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
KNOP1-201ENST00000219837 H0YCG3 227 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 SGSM2O43147 1006 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 USPL1Q5W0Q7 1092 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 SLC4A1P02730 911 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 HVCN1Q96D96 273 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 MAGED2Q9UNF1 606 aaPredicted RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 KRIT1O00522 736 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 NDUFAB1O14561 156 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 THAP12O43422 761 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 DDAH1O94760 285 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 OR52Z1P0C646 297 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 XPAP23025 273 aaPredicted RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 KRT26Q7Z3Y9 468 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 RNASELQ05823 741 aaKnown RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 TRIM37O94972 964 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 POLR2FP61218 127 aaKnown RBP12.16□□□□□ -0.46
KNOP1-201ENST00000219837 ELF2Q15723 593 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 NLRP7Q8WX94 980 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 HDAC11Q96DB2 347 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 SNX25Q9H3E2 840 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 RIC8AQ9NPQ8 531 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 TBX22Q9Y458 520 aa12.16□□□□□ -0.46
KNOP1-201ENST00000219837 ZFYVE16Q7Z3T8 1539 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 TTC30AQ86WT1 665 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 GBP7Q8N8V2 638 aaPredicted RBP12.15□□□□□ -0.46
KNOP1-201ENST00000219837 ZNF577Q9BSK1 485 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 EFCC1Q9HA90 598 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 PTPREP23469 700 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 SLC39A2Q9NP94 309 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 TROVE2P10155 538 aaKnown RBP eCLIP12.15□□□□□ -0.46
KNOP1-201ENST00000219837 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms