RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CCDC194A0A1B0GVG4 234 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 KINO60870 393 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 BMP3P12645 472 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 PFKFB1P16118 471 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 KIAA1755Q5JYT7 1200 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 GGA3Q9NZ52 723 aa22.49■■□□□ 1.19
TNFRSF1A-201ENST00000162749 GRIN1Q05586 938 aa22.48■■□□□ 1.19
TNFRSF1A-201ENST00000162749 RESP18Q5W5W9 173 aa22.48■■□□□ 1.19
TNFRSF1A-201ENST00000162749 CKAP2LQ8IYA6 745 aa22.48■■□□□ 1.19
TNFRSF1A-201ENST00000162749 TMEM232C9JQI7 657 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ZNF174Q15697 407 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 GOPCQ9HD26 462 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 SRPRBQ9Y5M8 271 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 MYH7BA7E2Y1 1941 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 BMP15O95972 392 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 QRICH1Q2TAL8 776 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 PPP1R18Q6NYC8 613 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 CCDC84Q86UT8 332 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 HPSEQ9Y251 543 aa22.47■■□□□ 1.19
TNFRSF1A-201ENST00000162749 FAM237AA0A1B0GTK4 181 aa22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 CDC37Q16543 378 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 C9orf131Q5VYM1 1079 aa22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 REXO1Q8N1G1 1221 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 INF2Q27J81 1249 aa22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 BTNL9Q6UXG8 535 aa22.46■■□□□ 1.19
TNFRSF1A-201ENST00000162749 ATP2C1P98194 919 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PTGDRQ13258 359 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PRAMEF18Q5VWM3 479 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SH2D4AQ9H788 454 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 VCPKMTQ9H867 229 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CTNND1O60716 968 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZNF202O95125 648 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 MCM7P33993 719 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ADCY7P51828 1080 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 IKQ13123 557 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SPECC1Q5M775 1068 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SYDE2Q5VT97 1194 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 KRT25Q7Z3Z0 450 aa22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZNF579Q8NAF0 562 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1A-201ENST00000162749 STAT2P52630 851 aa22.44■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZYXQ15942 572 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1A-201ENST00000162749 HS1BP3Q53T59 392 aa22.44■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZSCAN30Q86W11 494 aa22.44■■□□□ 1.18
TNFRSF1A-201ENST00000162749 BIN2Q9UBW5 565 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CTAGE5O15320 804 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SYKP43405 635 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 FAM83BQ5T0W9 1011 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 RIC8AQ9NPQ8 531 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CCDC192P0DO97 292 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 LMOD1P29536 600 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 DCAF15Q66K64 600 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CSRNP2Q9H175 543 aa22.43■■□□□ 1.18
TNFRSF1A-201ENST00000162749 INPP5BP32019 993 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 NONOQ15233 471 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 JAKMIP3Q5VZ66 844 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 FERMT2Q96AC1 680 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZNF341Q9BYN7 854 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ADARB2Q9NS39 739 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 GINM1Q9NU53 330 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PRR12Q9ULL5 1215 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PCDHA1Q9Y5I3 950 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PHIPQ8WWQ0 1821 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 TMEM260Q9NX78 707 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 KCNH3Q9ULD8 1083 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PPP2R3BQ9Y5P8 575 aa22.42■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SSC5DA1L4H1 1573 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SNAP25P60880 206 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 C4orf32Q8N8J7 132 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CUL5Q93034 780 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 HOOK2Q96ED9 719 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 SDF4Q9BRK5 362 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 TYRO3Q06418 890 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 UVSSAQ2YD98 709 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 FEZ1Q99689 392 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 ZNF112Q9UJU3 913 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 FZD1Q9UP38 647 aa22.41■■□□□ 1.18
TNFRSF1A-201ENST00000162749 CLK2P49760 499 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 USP49Q70CQ1 688 aa22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 TBCKQ8TEA7 893 aa22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 TIGD1Q96MW7 591 aa22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 AMNQ9BXJ7 453 aa22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 PSTPIP2Q9H939 334 aa22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1A-201ENST00000162749 NEK8Q86SG6 692 aa22.39■■□□□ 1.18
TNFRSF1A-201ENST00000162749 VWA3AA6NCI4 1184 aa22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 MRPL12P52815 198 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 UBE2SQ16763 222 aa22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ARL6IP4Q66PJ3 421 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 WRNIP1Q96S55 665 aa22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 FAM13BQ9NYF5 915 aa22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PARP14Q460N5 1801 aa22.39■■□□□ 1.17
TNFRSF1A-201ENST00000162749 LETM2Q2VYF4 491 aa22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 FBXO11Q86XK2 927 aa22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ERCC4Q92889 916 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ZKSCAN4Q969J2 545 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 KIAA1683Q9H0B3 1180 aa22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-201ENST00000162749 PLA2G6O60733 806 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms