RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Pbx2O35984 430 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Prom1O54990 867 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Srebf2Q3U1N2 1130 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Trim27Q62158 513 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Cachd1Q6PDJ1 1288 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Tspyl2Q7TQI8 677 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 1700001K19RikQ80ZT1 219 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Atg4aQ8C9S8 396 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Rhobtb2Q91V93 728 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 GldcQ91W43 1025 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Atg13Q91YI1 516 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 FanclQ9CR14 375 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Snx29Q9D3S3 818 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Pus10Q9D3U0 527 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Trmt112Q9DCG9 125 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 PolkQ9QUG2 852 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Hic1Q9R1Y5 733 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Clip2Q9Z0H8 1047 aa17.16■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Phka1P18826 1241 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 NapbP28663 298 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 FpgsP48760 587 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Map4k1P70218 827 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Myo19Q5SV80 963 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Elf1Q60775 612 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Fscn1Q61553 493 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 ScapQ6GQT6 1276 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Riox2Q8CD15 465 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Rab30Q923S9 203 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Arid3bQ9Z1N7 568 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Baz2bA2AUY4 2123 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Sall1Q9ER74 1322 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 1110002E22RikE0CYV9 1786 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 Zmym2Q9CU65 1376 aa17.15■□□□□ 0.34
Ccdc88c-204ENSMUST00000223097 SpibO35906 267 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Tlk2O55047 718 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Ptpn12P35831 775 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Rnf216P58283 853 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 DmwdQ08274 665 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Mcph1Q7TT79 822 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Rbm34Q8C5L7 375 aaKnown RBP17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Agbl2Q8CDK2 862 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Mtmr14Q8VEL2 648 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Sept3Q9Z1S5 350 aa17.14■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Pate3B3GLJ3 98 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Sap30bpQ02614 308 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Trappc3lQ4KL14 181 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Kctd1Q5M956 257 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Fam170aQ66LM6 333 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 NkrfQ8BY02 690 aaKnown RBP17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Gys1Q9Z1E4 738 aaKnown RBP17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Scn3aA2ASI5 1947 aa17.13■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 AW822073A0A0N4SUK1 652 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Metap2O08663 478 aaKnown RBP17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Alppl2P24823 529 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Zfp943Q6NZP4 507 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Ccdc178Q8CDV0 866 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Rhot2Q8JZN7 620 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 TrioQ0KL02 3102 aa17.12■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 DgkkE9Q7N4 1118 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 G430095P16RikE9Q913 147 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Snap25P60879 206 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 PtprcapQ64697 197 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Tekt3Q6X6Z7 490 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Znf618Q80YY7 953 aaKnown RBP17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Arhgef25Q9CWR0 618 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 PrelpQ9JK53 378 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Cdc42ep5Q9Z0X0 150 aa17.11■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Kif26aQ52KG5 1881 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Jakmip2D3YXK0 820 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Gm15448F6PZL4 682 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 StrnO55106 780 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Pde11aP0C1Q2 933 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Ftl1P29391 183 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Psmc6P62334 389 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 GaaP70699 953 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Eepd1Q3TGW2 569 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Kcna4Q61423 654 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Aldh5a1Q8BWF0 523 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Nop2Q922K7 793 aaKnown RBP17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Adam33Q923W9 797 aa17.1■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Myh7bA2AQP0 1941 aa17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Nmt2O70311 529 aa17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 BC048507Q80ZS7 89 aa17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Ppfibp1Q8C8U0 969 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 AnlnQ8K298 1121 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Xpo5Q924C1 1204 aaKnown RBP17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Zfp804bA0A0G2JGH6 1343 aa17.09■□□□□ 0.33
Ccdc88c-204ENSMUST00000223097 Cntnap2Q9CPW0 1332 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Fam71e1A1L3C1 212 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 DgkhD3YXJ0 1156 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Il13ra2O88786 383 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 OatP29758 439 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Rnf19aP50636 840 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Usp5P56399 858 aaKnown RBP17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 L3mbtl2P59178 703 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Xkr5Q5GH66 676 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Cep131Q62036 1060 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Haus6Q6NV99 933 aaKnown RBP17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Dalrd3Q6PJN8 538 aa17.08■□□□□ 0.32
Ccdc88c-204ENSMUST00000223097 Brd2Q7JJ13 798 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms