RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Elf1Q60775 612 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 NfkbibQ60778 359 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ifit1Q64282 463 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Myo6Q64331 1265 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Stn1Q8K2X3 378 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Slc18a1Q8R090 521 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Kdm5cP41230 1554 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Samd9lQ69Z37 1561 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Chl1P70232 1209 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 DSCC1Q14AI0 399 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Mtrf1lQ8BJU9 373 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rint1Q8BZ36 792 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gpcpd1Q8C0L9 675 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Appl2Q8K3G9 662 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Fam133bQ9CVI2 245 aaKnown RBP13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Q9DAQ4 598 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Dnajb7Q9QYI8 312 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Stx2Q00262 289 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ric8aQ3TIR3 530 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Cog7Q3UM29 770 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Sorbs1Q62417 1290 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ccdc15Q8C9M2 810 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Usp19Q3UJD6 1360 aa13.57□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Anxa1P10107 346 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rps8P62242 208 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Dnajc8Q6NZB0 253 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Msl1Q6PDM1 616 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Asxl2Q8BZ32 1370 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 AceP09470 1312 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Krt36B1AQ75 473 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Idh1O88844 414 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Nxf2Q4ZGD8 691 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Kcna6Q61923 529 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Q6PD19 689 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Fbxo11Q7TPD1 930 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Serpinb13Q8CDC0 389 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Usp33Q8R5K2 909 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gpr108Q91WD0 569 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Slc44a1Q6X893 653 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Olfr118Q7TRJ6 321 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Snx14Q8BHY8 964 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Smc6Q924W5 1097 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Tnfrsf10bQ9QZM4 381 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 PxdnQ3UQ28 1475 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Bach1P97302 739 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 WaplQ65Z40 1200 aaKnown RBP13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Basp1Q91XV3 226 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Dpp7Q9ET22 506 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ano3A2AHL1 981 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gdap1O88741 358 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 XlrP05531 208 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 InhbaQ04998 424 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ppp1r7Q3UM45 361 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Tshz1Q5DTH5 1084 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Trim28Q62318 834 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Zbtb40Q6PCS8 1258 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Nkiras1Q8CEC5 192 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Spc24Q9D083 201 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Dctpp1Q9QY93 170 aa13.56□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gm7995L7N2E4 160 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rasgrf1P27671 1262 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Nuak1Q641K5 658 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Asic4Q7TNS7 539 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Efcab14Q8BGQ6 484 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rps6ka5Q8C050 863 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 CnstQ8CBC4 711 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 IdeQ9JHR7 1019 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 FliiQ9JJ28 1271 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Pex3Q9QXY9 372 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Itgb1bp2Q9R000 350 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 S100a5P63084 93 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Trim71Q1PSW8 855 aaKnown RBP13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Tmtc1Q3UV71 942 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Prpf38aQ4FK66 312 aaKnown RBP13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Spata4Q8K3V1 295 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Mylk2Q8VCR8 613 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ciao1Q99KN2 339 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 MycbpQ9EQS3 103 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Clic4Q9QYB1 253 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Disp3A3KFU9 1347 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rrbp1Q99PL5 1605 aaKnown RBP13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Rab20P35295 233 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Polr2fP61219 127 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Ncoa7Q6DFV7 943 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Cep104Q80V31 926 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Pex11aQ9Z211 246 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Pla2r1Q62028 1487 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Timm44O35857 452 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Pcdha4O88689 947 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Casp14O89094 257 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Xrcc6P23475 608 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Lig3P97386 1015 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Slc30a9Q5IRJ6 567 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Klhl14Q69ZK5 630 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 QarsQ8BML9 775 aa13.55□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gcc2Q8CHG3 1679 aa13.54□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Gm43638A0A0J9YU36 694 aa13.54□□□□□ -0.24
Ssh1-202ENSMUST00000112298 Samsn1P57725 372 aa13.54□□□□□ -0.24
Ssh1-202ENSMUST00000112298 OtulinQ3UCV8 352 aa13.54□□□□□ -0.24
Ssh1-202ENSMUST00000112298 HarsQ61035 509 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms