RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Scn3aA2ASI5 1947 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Ankrd35E9Q9D8 996 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Tmem132bF7BAB2 1078 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Aco1P28271 889 aaKnown RBP16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Pou3f3P31361 497 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Traf5P70191 558 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Olfm4Q3UZZ4 505 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Slc9a1Q61165 820 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Slc45a1Q8BIV7 751 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 R3hcc1Q8BSI6 488 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Sec62Q8BU14 398 aaKnown RBP16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Serpinb13Q8CDC0 389 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Ccar2Q8VDP4 922 aaKnown RBP16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 NenfQ9CQ45 171 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Hip1rQ9JKY5 1068 aa16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 IkQ9Z1M8 557 aaKnown RBP16.86■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Fndc3c1Q6DFV6 1356 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Dicer1Q8R418 1916 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 C87977A2A958 498 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Arhgap4B1AUY3 965 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Yy1Q00899 414 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Slc16a10Q3U9N9 512 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Wdr93Q402B2 695 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Cnga2Q62398 664 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Casc1Q6TDU8 730 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Bicd2Q921C5 820 aa16.85■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Hoxa11P31311 313 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Meis2P97367 477 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Gjb4Q02738 266 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Trmt1Q3TX08 663 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Gm28047Q3US59 414 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Fbxo10Q7TQF2 950 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Kiaa1024Q8K3V7 917 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Tspyl4Q8VD63 406 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Cul5Q9D5V5 780 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Myo1hQ9D6A1 958 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Nr2e3Q9QXZ7 395 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Adgra2Q91ZV8 1336 aa16.84■□□□□ 0.29
Ercc1-201ENSMUST00000003645 Gucy1a2F8VQK3 730 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Kansl1lQ5DTI6 991 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Tnni3kQ5GIG6 834 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Fndc3bQ6NWW9 1207 aaKnown RBP16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Srek1Q8BZX4 494 aaKnown RBP16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Tmem60Q8K174 133 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Plcd1Q8R3B1 756 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Anapc4Q91W96 807 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cmtm5Q9D6G9 156 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Disp2Q8CIP5 1345 aa16.83■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Zmynd8A2A484 1235 aaKnown RBP16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Dnajb6O54946 365 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Eps15P42567 897 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 VegfbP49766 207 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Pla2g6P97819 807 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 DSCC1Q14AI0 399 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Gba2Q69ZF3 918 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Nap1l3Q794H2 544 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Entpd3Q8BFW6 529 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Mbtps2Q8CHX6 515 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Kdm4bQ91VY5 1086 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Kctd10Q922M3 315 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Serpinb3bQ9D1Q5 387 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Zbtb12Q9Z150 459 aa16.82■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Ampd3O08739 766 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Parp1P11103 1013 aaKnown RBP16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 MarcksP26645 309 aaKnown RBP16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Stat3P42227 770 aaKnown RBP16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cnnm3Q32NY4 713 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Esyt1Q3U7R1 1092 aaKnown RBP16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Taok2Q6ZQ29 1240 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Bhmt2Q91WS4 363 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Rnf181Q9CY62 165 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Clic4Q9QYB1 253 aa16.81■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Gjd2O54851 321 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Wnt7aP24383 349 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Jakmip3Q5DTN8 844 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Dcaf8Q8N7N5 591 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 NkapQ9D0F4 415 aaKnown RBP16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cdca7Q9D0M2 382 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Tmod4Q9JLH8 345 aa16.8■□□□□ 0.28
Ercc1-201ENSMUST00000003645 LtbrP50284 415 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 NfibP97863 570 aaKnown RBP16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Atp11aP98197 1187 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Trappc10Q3TLI0 1259 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Stxbp5lQ5DQR4 1185 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Mtmr3Q8K296 1196 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Stard7Q8R1R3 373 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Apobec3Q99J72 440 aaKnown RBP16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Fem1bQ9Z2G0 627 aa16.79■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Gm42688A0A0R3P9D1 673 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Phldb3E9QAF4 648 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 AoahO35298 574 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 FosP01101 380 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cst8P32766 142 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Cd22P35329 862 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 SelpQ01102 768 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Brd9Q3UQU0 596 aaKnown RBP16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Rgl1Q60695 768 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Hoxa13Q62424 386 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Ccdc172Q810N9 267 aa16.78■□□□□ 0.28
Ercc1-201ENSMUST00000003645 Ccdc142Q8CAI1 738 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms