RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PRKAR2AP13861 404 aaKnown RBP19.96■□□□□ 0.79
PHGDH-234ENST00000642041 FOSL2P15408 326 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 APOBRQ0VD83 1088 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 SCRN1Q12765 414 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 NFIAQ12857 509 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 CDC42EP5Q6NZY7 148 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 CTR9Q6PD62 1173 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 NFXL1Q6ZNB6 911 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 TOMM22Q9NS69 142 aa19.96■□□□□ 0.79
PHGDH-234ENST00000642041 NID2Q14112 1375 aa19.95■□□□□ 0.79
PHGDH-234ENST00000642041 B4E1Z4 1266 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 USP17L12C9JPN9 530 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 USP17L21D6R901 530 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 PRKAB2O43741 272 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 NPM3O75607 178 aaKnown RBP19.95■□□□□ 0.78
PHGDH-234ENST00000642041 LARGE1O95461 756 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 GCLCP48506 637 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-234ENST00000642041 DYNLL1P63167 89 aaKnown RBP19.95■□□□□ 0.78
PHGDH-234ENST00000642041 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 NECAB1Q8N987 351 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 TTYH1Q9H313 450 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-234ENST00000642041 FAM198AQ9UFP1 575 aa19.95■□□□□ 0.78
PHGDH-234ENST00000642041 KDM4AO75164 1064 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-234ENST00000642041 METAP2P50579 478 aaKnown RBP eCLIP19.94■□□□□ 0.781e-10■■■□□ 15.8
PHGDH-234ENST00000642041 KLHL40Q2TBA0 621 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 C12orf60Q5U649 245 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 TEX11Q8IYF3 940 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 TMEM87AQ8NBN3 555 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 SDR42E1Q8WUS8 393 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 SYAP1Q96A49 352 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-234ENST00000642041 SCAND2PQ9GZW5 306 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-234ENST00000642041 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
PHGDH-234ENST00000642041 MCM9Q9NXL9 1143 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 ZDHHC9Q9Y397 364 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 ATRNL1Q5VV63 1379 aa19.94■□□□□ 0.78
PHGDH-234ENST00000642041 TRIM75PA6NK02 468 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 GOLGA8BA8MQT2 603 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 ANTXR2P58335 489 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 STK3Q13188 491 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 TREML2Q5T2D2 321 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 LHX8Q68G74 356 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 TRIM22Q8IYM9 498 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 NSUN7Q8NE18 718 aaKnown RBP19.93■□□□□ 0.78
PHGDH-234ENST00000642041 SH3RF3Q8TEJ3 882 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-234ENST00000642041 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 TCP11L1Q9NUJ3 509 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 NAP1L2Q9ULW6 460 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-234ENST00000642041 MTMR6Q9Y217 621 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 ROBO3Q96MS0 1386 aa19.93■□□□□ 0.78
PHGDH-234ENST00000642041 POLR3DP05423 398 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-234ENST00000642041 XRCC5P13010 732 aaKnown RBP19.92■□□□□ 0.78
PHGDH-234ENST00000642041 CYP2B6P20813 491 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 KRT85P78386 507 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 SMAD3P84022 425 aaKnown RBP19.92■□□□□ 0.78
PHGDH-234ENST00000642041 CTDSPL2Q05D32 466 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 GSE1Q14687 1217 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 MCTP1Q6DN14 999 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 APOA5Q6Q788 366 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 CATIPQ7Z7H3 387 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 DGKHQ86XP1 1220 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 ZNF444Q8N0Y2 327 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-234ENST00000642041 FAM177A1Q8N128 213 aaPredicted RBP19.92■□□□□ 0.78
PHGDH-234ENST00000642041 STK36Q9NRP7 1315 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 PLXNB2O15031 1838 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 NAV1Q8NEY1 1877 aa19.92■□□□□ 0.78
PHGDH-234ENST00000642041 PHIPQ8WWQ0 1821 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 TMEM265A0A087WTH1 108 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 CTNND1O60716 968 aaKnown RBP19.91■□□□□ 0.78
PHGDH-234ENST00000642041 DDAH1O94760 285 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 XBP1P17861 261 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 RHBDL3P58872 404 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 MAP3K10Q02779 954 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 SHHQ15465 462 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 ZFPM1Q8IX07 1006 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 PROCA1Q8NCQ7 364 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-234ENST00000642041 ZSCAN10Q96SZ4 725 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-234ENST00000642041 LY9Q9HBG7 655 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 USP40Q9NVE5 1235 aa19.91■□□□□ 0.78
PHGDH-234ENST00000642041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.78
PHGDH-234ENST00000642041 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 GNAQP50148 359 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 CACNB2Q08289 660 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 RRP12Q5JTH9 1297 aaKnown RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 CYB5R4Q7L1T6 521 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 TRMT44Q8IYL2 757 aaKnown RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 ANKS1AQ92625 1134 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 LARP6Q9BRS8 491 aaKnown RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 LRRC2Q9BYS8 371 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 DHX36Q9H2U1 1008 aaKnown RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 MKNK2Q9HBH9 465 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 PRKAG2Q9UGJ0 569 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 SWAP70Q9UH65 585 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 DDX49Q9Y6V7 483 aaKnown RBP19.9■□□□□ 0.78
PHGDH-234ENST00000642041 NEDD4P46934 1319 aa19.9■□□□□ 0.78
PHGDH-234ENST00000642041 VPS37CA5D8V6 355 aaPredicted RBP19.89■□□□□ 0.77
PHGDH-234ENST00000642041 RANBP6O60518 1105 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms