RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	PPP1R9A	Q9ULJ8	1098 aa		12.02	□□□□□ -0.49
PHGDH-222	ENST00000641587	SYNRG	Q9UMZ2	1314 aa		12.02	□□□□□ -0.49
PHGDH-222	ENST00000641587	ROBO3	Q96MS0	1386 aa		12.02	□□□□□ -0.49
PHGDH-222	ENST00000641587	IFIT2	P09913	472 aa	Known RBP	12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	AKR1A1	P14550	325 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	DNAJB2	P25686	324 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	STAT3	P40763	770 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	FPGS	Q05932	587 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	FAAP100	Q0VG06	881 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	KCTD2	Q14681	263 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	STK11IP	Q8N1F8	1099 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	KIF1BP	Q96EK5	621 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	CCDC17	Q96LX7	622 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	PRDM6	Q9NQX0	595 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	ATP8A2	Q9NTI2	1148 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	TMEM39A	Q9NV64	488 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	NRBP1	Q9UHY1	535 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	RIPK3	Q9Y572	518 aa		12.01	□□□□□ -0.49
PHGDH-222	ENST00000641587	ADCY6	O43306	1168 aa		12	□□□□□ -0.49
PHGDH-222	ENST00000641587	SNAI1	O95863	264 aa	Predicted RBP	12	□□□□□ -0.49
PHGDH-222	ENST00000641587	ACLY	P53396	1101 aa		12	□□□□□ -0.49
PHGDH-222	ENST00000641587	HSP90AB4P	Q58FF6	505 aa		12	□□□□□ -0.49
PHGDH-222	ENST00000641587	STARD7	Q9NQZ5	370 aa		12	□□□□□ -0.49
PHGDH-222	ENST00000641587	ZHX1	Q9UKY1	873 aa	Predicted RBP	12	□□□□□ -0.49
PHGDH-222	ENST00000641587	TTC28	Q96AY4	2481 aa		12	□□□□□ -0.49
PHGDH-222	ENST00000641587	MYO9B	Q13459	2157 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	PBX2	P40425	430 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	SLC4A3	P48751	1232 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	KCNA10	Q16322	511 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	ANKRD45	Q5TZF3	282 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	SNRNP48	Q6IEG0	339 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	CTR9	Q6PD62	1173 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	ANKRD33	Q7Z3H0	272 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	SMC5	Q8IY18	1101 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	KLHDC9	Q8NEP7	349 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	PUS7L	Q9H0K6	701 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	DCTPP1	Q9H773	170 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	KANSL2	Q9H9L4	492 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	GOPC	Q9HD26	462 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	CNPY2	Q9Y2B0	182 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	DIS3	Q9Y2L1	958 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	SLC4A4	Q9Y6R1	1079 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	MYH4	Q9Y623	1939 aa		11.99	□□□□□ -0.49
PHGDH-222	ENST00000641587	TMEM265	A0A087WTH1	108 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	GRXCR1	A8MXD5	290 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	TIFA	Q96CG3	184 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	FGD4	Q96M96	766 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	HAUS7	Q99871	368 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	ZNF576	Q9H609	170 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	TBX21	Q9UL17	535 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	CHD7	Q9P2D1	2997 aa		11.98	□□□□□ -0.49
PHGDH-222	ENST00000641587	REV3L	O60673	3130 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	CHD9	Q3L8U1	2897 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	DNAJC25-GNG10	A0A024R161	153 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	DCDC2C	A8MYV0	355 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	RAB11FIP3	O75154	756 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	NDUFB10	O96000	172 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	ACR	P10323	421 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	ATP5J	P18859	108 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	RASA1	P20936	1047 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	PTGS1	P23219	599 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	C16orf59	Q7L2K0	433 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	AMOTL1	Q8IY63	956 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	CPXCR1	Q8N123	301 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	PPM1E	Q8WY54	764 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	SLF1	Q9BQI6	1058 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	TSEN34	Q9BSV6	310 aa	Known RBP	11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	TEX13B	Q9BXU2	312 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	PPP1R12C	Q9BZL4	782 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	LRRCC1	Q9C099	1032 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	1e-14	■□□□□ 11
PHGDH-222	ENST00000641587	FAM184B	Q9ULE4	1060 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	GBF1	Q92538	1859 aa		11.97	□□□□□ -0.49
PHGDH-222	ENST00000641587	SYNGAP1	Q96PV0	1343 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	XIRP2	A4UGR9	3374 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	MOXD2P	A6NHM9	499 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587		F5H6K3	240 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	SMARCA5	O60264	1052 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	TIMP1	P01033	207 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	ASGR1	P07306	291 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	C6orf222	P0C671	652 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	CSF2RA	P15509	400 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	KLRC3	Q07444	240 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	UBE3C	Q15386	1083 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	TMEM240	Q5SV17	173 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	NUP133	Q8WUM0	1156 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	DDX11	Q96FC9	970 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	TOX2	Q96NM4	488 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	PBX4	Q9BYU1	374 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	LNPK	Q9C0E8	428 aa		11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	RAVER2	Q9HCJ3	691 aa	Known RBP	11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-222	ENST00000641587	DUSP11	O75319	330 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	COPB2	P35606	906 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	CDK7	P50613	346 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms