RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 PDXDC2PQ6P474 469 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 DRC1Q96MC2 740 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 BRIP1Q9BX63 1249 aa16.43■□□□□ 0.22
SCARB2-221ENST00000640341 MAGEC2Q9UBF1 373 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
SCARB2-221ENST00000640341 DDAH1O94760 285 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 KLK7P49862 253 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 GPS2Q13227 327 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 E2F4Q16254 413 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 PBX1P40424 430 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 PFKFB3Q16875 520 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 ZNF658Q5TYW1 1059 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 CALCOCO1Q9P1Z2 691 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 RWDD2AQ9UIY3 292 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 EPN1Q9Y6I3 576 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 KIF5BP33176 963 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
SCARB2-221ENST00000640341 ANKIB1Q9P2G1 1089 aa16.42■□□□□ 0.22
SCARB2-221ENST00000640341 CCDC151A5D8V7 595 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 RCAN1P53805 252 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 FAM193AP78312 1265 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-221ENST00000640341 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
SCARB2-221ENST00000640341 RPS8P62241 208 aaKnown RBP16.41■□□□□ 0.22
SCARB2-221ENST00000640341 MRPS25P82663 173 aaKnown RBP16.41■□□□□ 0.22
SCARB2-221ENST00000640341 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
SCARB2-221ENST00000640341 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 PSMB7Q99436 277 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 TBC1D9BQ66K14 1250 aa16.41■□□□□ 0.22
SCARB2-221ENST00000640341 ERLIN1O75477 346 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 NDUFA10O95299 355 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 SPAG1Q07617 926 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 TGFBRAP1Q8WUH2 860 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 MTA3Q9BTC8 594 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 DISC1Q9NRI5 854 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 FAM182BQ5T319 152 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 CSGALNACT2Q8N6G5 542 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 NUP98P52948 1817 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 NID2Q14112 1375 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 ZNF804BA4D1E1 1349 aa16.4■□□□□ 0.22
SCARB2-221ENST00000640341 MTIF2P46199 727 aaKnown RBP16.39■□□□□ 0.22
SCARB2-221ENST00000640341 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.22
SCARB2-221ENST00000640341 TAF3Q5VWG9 929 aa16.39■□□□□ 0.22
SCARB2-221ENST00000640341 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.22
SCARB2-221ENST00000640341 NLRP3Q96P20 1036 aa16.39■□□□□ 0.22
SCARB2-221ENST00000640341 ECM29Q5VYK3 1845 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 CCNT1O60563 726 aaKnown RBP16.39■□□□□ 0.21
SCARB2-221ENST00000640341 IPO7O95373 1038 aaKnown RBP16.39■□□□□ 0.21
SCARB2-221ENST00000640341 ASIC1P78348 528 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 STIM1Q13586 685 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 JADE2Q9NQC1 790 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
SCARB2-221ENST00000640341 DUSP10Q9Y6W6 482 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 PSMA7O14818 248 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 HSP90B2PQ58FF3 399 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 RCSD1Q6JBY9 416 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
SCARB2-221ENST00000640341 OR8K1Q8NGG5 319 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 FAN1Q9Y2M0 1017 aa16.39■□□□□ 0.21
SCARB2-221ENST00000640341 MYH3P11055 1940 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 CALML3P27482 149 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 ARHGAP25P42331 645 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARB2-221ENST00000640341 DNA2P51530 1060 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 PDE4DQ08499 809 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 TBC1D8BQ0IIM8 1120 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 BRD3Q15059 726 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 HDXQ7Z353 690 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 LRP6O75581 1613 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 TECP42680 631 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 IL17RBQ9NRM6 502 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 PCDHA4Q9UN74 947 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 SRCAPQ6ZRS2 3230 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 ATP1A1P05023 1023 aaKnown RBP16.38■□□□□ 0.21
SCARB2-221ENST00000640341 FCER1AP12319 257 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 CAPN2P17655 700 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 NAPAP54920 295 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-221ENST00000640341 IRF2BP1Q8IU81 584 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
SCARB2-221ENST00000640341 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
SCARB2-221ENST00000640341 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.21
SCARB2-221ENST00000640341 ZSCAN26Q16670 478 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms