RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FAM110CQ1W6H9 321 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
GTF3A-209ENST00000640289 FAM160B2Q86V87 743 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 CCDC144CPQ8IYA2 1237 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 PRPF38AQ8NAV1 312 aaKnown RBP15.42■□□□□ 0.06
GTF3A-209ENST00000640289 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
GTF3A-209ENST00000640289 CHURC1Q8WUH1 139 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
GTF3A-209ENST00000640289 AGXT2Q9BYV1 514 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 PDRG1Q9NUG6 133 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 ADAMTS5Q9UNA0 930 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
GTF3A-209ENST00000640289 PLA2G6O60733 806 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 FKTNO75072 461 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 ERVK-9P63128 1117 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 ERVK-24P63145 666 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 CAP1Q01518 475 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 APOA5Q6Q788 366 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 BTNL9Q6UXG8 535 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 MICU3Q86XE3 530 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 REPS2Q8NFH8 660 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 ARHGAP39Q9C0H5 1083 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 RABGAP1Q9Y3P9 1069 aa15.41■□□□□ 0.06
GTF3A-209ENST00000640289 PALM3A6NDB9 673 aaPredicted RBP15.4■□□□□ 0.06
GTF3A-209ENST00000640289 CTGFP29279 349 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 PLS1Q14651 629 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 TMEM132BQ14DG7 1078 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 NOM1Q5C9Z4 860 aaKnown RBP15.4■□□□□ 0.06
GTF3A-209ENST00000640289 SYDE2Q5VT97 1194 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 GPRC5AQ8NFJ5 357 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 CD99L2Q8TCZ2 262 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 TBC1D32Q96NH3 1257 aa15.4■□□□□ 0.06
GTF3A-209ENST00000640289 NAP1L2Q9ULW6 460 aaPredicted RBP15.4■□□□□ 0.06
GTF3A-209ENST00000640289 RLFQ13129 1914 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 ZBED4O75132 1171 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 NEK4P51957 841 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 AK2P54819 239 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 LACTBP83111 547 aaPredicted RBP15.39■□□□□ 0.05
GTF3A-209ENST00000640289 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 SYNE3Q6ZMZ3 975 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 MB21D1Q8N884 522 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 CTCFLQ8NI51 663 aaPredicted RBP15.39■□□□□ 0.05
GTF3A-209ENST00000640289 PORCNQ9H237 461 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
GTF3A-209ENST00000640289 RAVER2Q9HCJ3 691 aaKnown RBP15.39■□□□□ 0.05
GTF3A-209ENST00000640289 A0A0G2JMZ2 1700 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 GOLGA8AA7E2F4 631 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 GOLGA8BA8MQT2 603 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 ZBTB43O43298 467 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 PLEKHA8P1O95397 391 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CALM1P0DP23 149 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CALM2P0DP24 149 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CALM3P0DP25 149 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 TAL1P17542 331 aaPredicted RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CCDC174Q6PII3 467 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 NOL8Q76FK4 1167 aaKnown RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CPXCR1Q8N123 301 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CMTR1Q8N1G2 835 aaKnown RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 FANCBQ8NB91 859 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 MOV10L1Q9BXT6 1211 aaKnown RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 SPATC1LQ9H0A9 340 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 EFCC1Q9HA90 598 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 VAT1LQ9HCJ6 419 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CTDP1Q9Y5B0 961 aaPredicted RBP15.38■□□□□ 0.05
GTF3A-209ENST00000640289 ZNF536O15090 1300 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 PCNTO95613 3336 aa15.38■□□□□ 0.05
GTF3A-209ENST00000640289 CYTH3O43739 400 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
GTF3A-209ENST00000640289 CDC27P30260 824 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 KIF5BP33176 963 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 PSMC4P43686 418 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 SLC4A3P48751 1232 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 ERO1AQ96HE7 468 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 AGBL1Q96MI9 1066 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 ALDH8A1Q9H2A2 487 aaPredicted RBP15.37■□□□□ 0.05
GTF3A-209ENST00000640289 RANBP17Q9H2T7 1088 aaKnown RBP15.37■□□□□ 0.05
GTF3A-209ENST00000640289 JMJD4Q9H9V9 463 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 FAM217BQ9NTX9 383 aaPredicted RBP15.37■□□□□ 0.05
GTF3A-209ENST00000640289 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 PARP14Q460N5 1801 aa15.37■□□□□ 0.05
GTF3A-209ENST00000640289 FDX1P10109 184 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 ERCC3P19447 782 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 PDIA3P30101 505 aaKnown RBP15.36■□□□□ 0.05
GTF3A-209ENST00000640289 STAT3P40763 770 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 METAP2P50579 478 aaKnown RBP eCLIP15.36■□□□□ 0.05
GTF3A-209ENST00000640289 EVCP57679 992 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 KIF22Q14807 665 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 SNRNP48Q6IEG0 339 aaKnown RBP15.36■□□□□ 0.05
GTF3A-209ENST00000640289 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
GTF3A-209ENST00000640289 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
GTF3A-209ENST00000640289 TPCN1Q9ULQ1 816 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms