RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TUBB4BP68371 445 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TRIM14Q14142 442 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 PPP2R5AQ15172 486 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA5Q8TBA6 731 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TRIM7Q9C029 511 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 ZNF500O60304 480 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GTF2A1P52655 376 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GABPB1Q06547 395 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GRAPQ13588 217 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 CCDC122Q5T0U0 273 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GPATCH11Q8N954 259 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GRAPLQ8TC17 118 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 SERPINB13Q9UIV8 391 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 IQCA1LA6NCM1 817 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 ERVV-1B6SEH8 477 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 TTLL1O95922 423 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 CCDC26Q8TAB7 109 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 MIS12Q9H081 205 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 LZTFL1Q9NQ48 299 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 PARP2Q9UGN5 583 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 AFG3L2Q9Y4W6 797 aa10.82□□□□□ -0.68
CLTCL1-211ENST00000621271 GCC2Q8IWJ2 1684 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 STK25O00506 426 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 PHKA1P46020 1223 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 CYP2J2P51589 502 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 MNAT1P51948 309 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SLC9C1Q4G0N8 1177 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 GALNT17Q6IS24 598 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 METTL23Q86XA0 190 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 COA7Q96BR5 231 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 METP08581 1390 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 RPS6KA4O75676 772 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 MIGA2Q7L4E1 593 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 NEK8Q86SG6 692 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 OTUD7AQ8TE49 926 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 NACC1Q96RE7 527 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 COA1Q9GZY4 146 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 PI4KBQ9UBF8 816 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 DDX25Q9UHL0 483 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 RSPH14Q9UHP6 348 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SNX14Q9Y5W7 946 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SMIM23A6NLE4 172 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 AKR1B15C9JRZ8 316 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 CAPN2P17655 700 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 XPAP23025 273 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 CUL4BQ13620 913 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ERBB3P21860 1342 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ATP10DQ9P241 1426 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 TLDC2A0PJX2 215 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ARHGEF37A1IGU5 675 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ITIH3Q06033 890 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SYT10Q6XYQ8 523 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 PPANQ9NQ55 473 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ANKFY1Q9P2R3 1169 aa10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
CLTCL1-211ENST00000621271 ANKARQ7Z5J8 1434 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 DDAH1O94760 285 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 VAV2P52735 878 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 CCDC6Q16204 474 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 IFT81Q8WYA0 676 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 SELENOSQ9BQE4 189 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 CACYBPQ9HB71 228 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 OPA1O60313 960 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ZFP91Q96JP5 570 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 SEC31BQ9NQW1 1179 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 C1orf112Q9NSG2 853 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA6CA6NDK9 693 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA6BA6NDN3 693 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 INO80B-WBP1J3KQ70 363 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA6DP0CG33 693 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 BMP3P12645 472 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 PTPREP23469 700 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 PLCB4Q15147 1175 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 UBE3CQ15386 1083 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ARHGAP44Q17R89 818 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ZNF569Q5MCW4 686 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 PIGBQ92521 554 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 INO80BQ9C086 356 aaPredicted RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 GOLGA6AQ9NYA3 693 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 ABCC3O15438 1527 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 GNA14O95837 355 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 LRMPQ12912 555 aa10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 KARSQ15046 597 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-211ENST00000621271 CASC4Q6P4E1 433 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms