RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 IL17RBQ9NRM6 502 aa13.31□□□□□ -0.28
C11orf54-215ENST00000617482 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-215ENST00000617482 ATP8B1O43520 1251 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 CHP1Q99653 195 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 FUT8Q9BYC5 575 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 TTF2Q9UNY4 1162 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 CALML3P27482 149 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 OAS2P29728 719 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 LONRF2Q1L5Z9 754 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 ARL6IP4Q66PJ3 421 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
C11orf54-215ENST00000617482 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 PCDHA4Q9UN74 947 aa13.3□□□□□ -0.28
C11orf54-215ENST00000617482 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 USP17L3A6NCW0 530 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 USP17L4A6NCW7 530 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 PMS1P54277 932 aaKnown RBP13.29□□□□□ -0.28
C11orf54-215ENST00000617482 SPAG1Q07617 926 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 DTHD1Q6ZMT9 781 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 USP17L1Q7RTZ2 530 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 IRF2BP1Q8IU81 584 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 NLRP3Q96P20 1036 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 PARP1P09874 1014 aaKnown RBP13.29□□□□□ -0.28
C11orf54-215ENST00000617482 FECHP22830 423 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 CYP2C19P33261 490 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 USP5P45974 858 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 INF2Q27J81 1249 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 SBK1Q52WX2 424 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 CEP112Q8N8E3 955 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
C11orf54-215ENST00000617482 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
C11orf54-215ENST00000617482 RHOXF2BP0C7M4 288 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 GYS2P54840 703 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 ST5P78524 1137 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-215ENST00000617482 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-215ENST00000617482 PNKPQ96T60 521 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 RHOXF2Q9BQY4 288 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 TRIM10Q9UDY6 481 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
C11orf54-215ENST00000617482 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 CCDC151A5D8V7 595 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 H7C1D1 291 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 UBA7P41226 1012 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 ADSSL1Q8N142 457 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 SETDB2Q96T68 719 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 NAPGQ99747 312 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-215ENST00000617482 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-215ENST00000617482 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 PCDHA6Q9UN73 950 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 PCDHA8Q9Y5H6 950 aa13.28□□□□□ -0.28
C11orf54-215ENST00000617482 MYH13Q9UKX3 1938 aa13.27□□□□□ -0.28
C11orf54-215ENST00000617482 CCDC66A2RUB6 948 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 GOLGA8HP0CJ92 632 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 SLC35G1Q2M3R5 365 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 C12orf60Q5U649 245 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 JAKMIP3Q5VZ66 844 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 SLC44A5Q8NCS7 719 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.29
C11orf54-215ENST00000617482 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 MAD2L2Q9UI95 211 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 TFR2Q9UP52 801 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 EPN1Q9Y6I3 576 aaPredicted RBP13.27□□□□□ -0.29
C11orf54-215ENST00000617482 CYTH3O43739 400 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 MCM6Q14566 821 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 BRD3Q15059 726 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 DGKHQ86XP1 1220 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 SUGCTQ9HAC7 445 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 STX8Q9UNK0 236 aa13.27□□□□□ -0.29
C11orf54-215ENST00000617482 M0R2N6 131 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 NDUFA10O95299 355 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 FAM193AP78312 1265 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 TRIM14Q14142 442 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 DIXDC1Q155Q3 683 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 NEK11Q8NG66 645 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
C11orf54-215ENST00000617482 TRIM47Q96LD4 638 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms