RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 AKR1B1P15121 316 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 ERCC5P28715 1186 aaPredicted RBP17.88■□□□□ 0.45
NR1H3-235ENST00000616973 SCNN1DP51172 638 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 DPYDQ12882 1025 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 E2F4Q16254 413 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 FILIP1Q7Z7B0 1213 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 IQUBQ8NA54 791 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 PRIMPOLQ96LW4 560 aa17.88■□□□□ 0.45
NR1H3-235ENST00000616973 GNA11P29992 359 aa17.87■□□□□ 0.45
NR1H3-235ENST00000616973 CRKP46108 304 aa17.87■□□□□ 0.45
NR1H3-235ENST00000616973 KRT25Q7Z3Z0 450 aa17.87■□□□□ 0.45
NR1H3-235ENST00000616973 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
NR1H3-235ENST00000616973 C6orf50Q9HD87 102 aa17.87■□□□□ 0.45
NR1H3-235ENST00000616973 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
NR1H3-235ENST00000616973 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 HLA-DOAP06340 250 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 ATP1A3P13637 1013 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 SHMT1P34896 483 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 PRPHP41219 470 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 NAPAP54920 295 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 RASGRP2Q7LDG7 609 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 CCDC150Q8NCX0 1101 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 RASGRP4Q8TDF6 673 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 DBNDD1Q9H9R9 158 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 FANCLQ9NW38 375 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
NR1H3-235ENST00000616973 TTLL1O95922 423 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 UBASH3AP57075 661 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 CCZ1BP86790 482 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 CCZ1P86791 482 aaPredicted RBP17.86■□□□□ 0.45
NR1H3-235ENST00000616973 PDXDC2PQ6P474 469 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 KCND1Q9NSA2 647 aa17.86■□□□□ 0.45
NR1H3-235ENST00000616973 AFMP43652 599 aa17.85■□□□□ 0.45
NR1H3-235ENST00000616973 ARID5BQ14865 1188 aa17.85■□□□□ 0.45
NR1H3-235ENST00000616973 DACT2Q5SW24 774 aa17.85■□□□□ 0.45
NR1H3-235ENST00000616973 TMC6Q7Z403 805 aa17.85■□□□□ 0.45
NR1H3-235ENST00000616973 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
NR1H3-235ENST00000616973 SMCO2A6NFE2 343 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 ECE2O60344 883 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 SERPINC1P01008 464 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 SKILP12757 684 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 ZNF18P17022 549 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 TXLNAP40222 546 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 ORC2Q13416 577 aaPredicted RBP17.84■□□□□ 0.45
NR1H3-235ENST00000616973 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 INF2Q27J81 1249 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 CC2D2BQ6DHV5 1058 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 PIGSQ96S52 555 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
NR1H3-235ENST00000616973 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
NR1H3-235ENST00000616973 FMR1Q06787 632 aaKnown RBP eCLIP17.84■□□□□ 0.45
NR1H3-235ENST00000616973 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.45
NR1H3-235ENST00000616973 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 DTHD1Q6ZMT9 781 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 IDI2Q9BXS1 227 aa17.84■□□□□ 0.45
NR1H3-235ENST00000616973 GTPBP6O43824 516 aaPredicted RBP17.83■□□□□ 0.44
NR1H3-235ENST00000616973 ZNF543Q08ER8 600 aa17.83■□□□□ 0.44
NR1H3-235ENST00000616973 HOMER1Q86YM7 354 aa17.83■□□□□ 0.44
NR1H3-235ENST00000616973 CCSER1Q9C0I3 900 aa17.83■□□□□ 0.44
NR1H3-235ENST00000616973 KCNQ5Q9NR82 932 aa17.83■□□□□ 0.44
NR1H3-235ENST00000616973 ARFGEF1Q9Y6D6 1849 aa17.83■□□□□ 0.44
NR1H3-235ENST00000616973 KCNJ6P48051 423 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 NFIAQ12857 509 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 MYRIPQ8NFW9 859 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 DPF2Q92785 391 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 MED15Q96RN5 788 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 NFE2L3Q9Y4A8 694 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 UQCRHP07919 91 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 CUL4BQ13620 913 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 CFAP100Q494V2 611 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 VSTM4Q8IW00 320 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 LRRC47Q8N1G4 583 aaKnown RBP17.82■□□□□ 0.44
NR1H3-235ENST00000616973 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 TMEM60Q9H2L4 133 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 VAT1LQ9HCJ6 419 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 SERPINA10Q9UK55 444 aa17.82■□□□□ 0.44
NR1H3-235ENST00000616973 SEMA3FQ13275 785 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 GPATCH4Q5T3I0 446 aaKnown RBP17.81■□□□□ 0.44
NR1H3-235ENST00000616973 PPP1R18Q6NYC8 613 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 KIAA0825Q8IV33 1275 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 AK8Q96MA6 479 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 CAMKK2Q96RR4 588 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 DISC1Q9NRI5 854 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
NR1H3-235ENST00000616973 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
NR1H3-235ENST00000616973 SFPQP23246 707 aaKnown RBP eCLIP17.8■□□□□ 0.44
NR1H3-235ENST00000616973 CHRNA5P30532 468 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 SPATA1Q5VX52 437 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 REXO1Q8N1G1 1221 aaKnown RBP17.8■□□□□ 0.44
NR1H3-235ENST00000616973 PPP1R3GB7ZBB8 358 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 MYL1P05976 194 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 GRIPAP1Q4V328 841 aa17.8■□□□□ 0.44
NR1H3-235ENST00000616973 ZFPM1Q8IX07 1006 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms