RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MYCLP12524 364 aaPredicted RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 KRT15P19012 456 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TNFAIP1Q13829 316 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KMT5BQ4FZB7 885 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SPZ1Q9BXG8 430 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 ZSWIM6Q9HCJ5 1215 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TNNQ9UQP3 1299 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 RABGAP1Q9Y3P9 1069 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 hCG_1984214I3L0E3 225 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SP4Q02446 784 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 CUL4BQ13620 913 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KRT71Q3SY84 523 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 RINT1Q6NUQ1 792 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 ZNF713Q8N859 430 aaPredicted RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 XPO4Q9C0E2 1151 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 STK32BQ9NY57 414 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 IVNS1ABPQ9Y6Y0 642 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 A0A1W2PQ27 194 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 A0A1W2PQ64 194 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 A0A1W2PQD8 194 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 GOLGA8CPA6NN73 597 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KRIT1O00522 736 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TRAPPC10P48553 1259 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 EIF6P56537 245 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 KLHL7Q8IXQ5 586 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SLF1Q9BQI6 1058 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 RIOK1Q9BRS2 568 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 DDX25Q9UHL0 483 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 IPO11Q9UI26 975 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 PASKQ96RG2 1323 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 EVI5O60447 810 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 RPN1P04843 607 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 OR52Z1P0C646 297 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 ZNF853P0CG23 659 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 CTNNA1P35221 906 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 ME3Q16798 604 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 C10orf76Q5T2E6 689 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 MYSM1Q5VVJ2 828 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 CASC4Q6P4E1 433 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SEPT14Q6ZU15 432 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TTC16Q8NEE8 873 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 OTUD7AQ8TE49 926 aaPredicted RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 PANK4Q9NVE7 773 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 BTG4Q9NY30 223 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 MRPL11Q9Y3B7 192 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 ANKARQ7Z5J8 1434 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 GADD45BO75293 160 aaPredicted RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 U2AF2P26368 475 aaKnown RBP eCLIP5.02□□□□□ -1.613e-6■■■□□ 17
CHD9-221ENST00000615216 CABS1Q96KC9 395 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KLHL14Q9P2G3 628 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 NLRP1Q9C000 1473 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SMCO2A6NFE2 343 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TCP1P17987 556 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 STX2P32856 288 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KRT24Q2M2I5 525 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 PHLDB3Q6NSJ2 640 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 MIER3Q7Z3K6 550 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 CCDC13Q8IYE1 715 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 NCAPGQ9BPX3 1015 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 GLI2P10070 1586 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 PHLPP2Q6ZVD8 1323 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 USH1GQ495M9 461 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 VPS37BQ9H9H4 285 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 SEMA3EO15041 775 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 TNNC2P02585 160 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 KRT3P12035 628 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 NT5C2P49902 561 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 ZBTB8OSQ8IWT0 167 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 NIM1KQ8IY84 436 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 DDX41Q9UJV9 622 aaKnown RBP5.02□□□□□ -1.61
CHD9-221ENST00000615216 NOD1Q9Y239 953 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 PPP2R2CQ9Y2T4 447 aa5.02□□□□□ -1.61
CHD9-221ENST00000615216 GARSP41250 739 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 TIMM10P62072 90 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 HADHQ16836 314 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 ANKRD20A3Q5VUR7 823 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 RETREG2Q8NC44 543 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 PROCA1Q8NCQ7 364 aaPredicted RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 SSH3Q8TE77 659 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 AK8Q96MA6 479 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TBC1D7Q9P0N9 293 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 MAPK8IP1Q9UQF2 711 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 RNF17Q9BXT8 1623 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 PNMA6EA0A0J9YXQ4 647 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 EIF4A1P60842 406 aaKnown RBP5.01□□□□□ -1.61
CHD9-221ENST00000615216 MUM1L1Q5H9M0 696 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ARHGEF16Q5VV41 709 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TRIM50Q86XT4 487 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 TGFBRAP1Q8WUH2 860 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 VPS54Q9P1Q0 977 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 JAG2Q9Y219 1238 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 USTQ9Y2C2 406 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 NCAPD2Q15021 1401 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 ATP8B1O43520 1251 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 GAP43P17677 238 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 BPIFB4P59827 614 aa5.01□□□□□ -1.61
CHD9-221ENST00000615216 SATB1Q01826 763 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms