RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 HAUS7Q99871 368 aa18.94■□□□□ 0.62
HDDC2-210ENST00000609574 PRDM6Q9NQX0 595 aa18.94■□□□□ 0.62
HDDC2-210ENST00000609574 ZNF214Q9UL59 606 aaPredicted RBP18.94■□□□□ 0.62
HDDC2-210ENST00000609574 LAMA2P24043 3122 aaKnown RBP18.94■□□□□ 0.62
HDDC2-210ENST00000609574 NAV1Q8NEY1 1877 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 TLR3O15455 904 aaKnown RBP18.93■□□□□ 0.62
HDDC2-210ENST00000609574 DUSP11O75319 330 aaKnown RBP18.93■□□□□ 0.62
HDDC2-210ENST00000609574 DNAJB2P25686 324 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 EPHB4P54760 987 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 CTR9Q6PD62 1173 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 TMEM199Q8N511 208 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 GAS2L1Q99501 681 aaPredicted RBP18.93■□□□□ 0.62
HDDC2-210ENST00000609574 ZNF576Q9H609 170 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 DDX19BQ9UMR2 479 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 RLFQ13129 1914 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 ELP1O95163 1332 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 ROBO3Q96MS0 1386 aa18.93■□□□□ 0.62
HDDC2-210ENST00000609574 F5H6K3 240 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 ADAMTS4O75173 837 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 C6orf222P0C671 652 aaPredicted RBP18.92■□□□□ 0.62
HDDC2-210ENST00000609574 KLRC3Q07444 240 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 MFSD5Q6N075 450 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 ZNF467Q7Z7K2 595 aaPredicted RBP18.92■□□□□ 0.62
HDDC2-210ENST00000609574 ZNF444Q8N0Y2 327 aaPredicted RBP18.92■□□□□ 0.62
HDDC2-210ENST00000609574 CPXCR1Q8N123 301 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 ZBED9Q6R2W3 1325 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
HDDC2-210ENST00000609574 ACVR2BQ13705 512 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 GRIN2CQ14957 1233 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 SLFNL1Q499Z3 407 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 TJAP1Q5JTD0 557 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 MAMDC4Q6UXC1 1216 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 KLHDC9Q8NEP7 349 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 REPS2Q8NFH8 660 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 LENG1Q96BZ8 264 aaPredicted RBP18.91■□□□□ 0.62
HDDC2-210ENST00000609574 MTIF3Q9H2K0 278 aaKnown RBP18.91■□□□□ 0.62
HDDC2-210ENST00000609574 ABHD16BQ9H3Z7 469 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 NYAP2Q9P242 653 aa18.91■□□□□ 0.62
HDDC2-210ENST00000609574 MINDY4BA8MYZ0 360 aa18.9■□□□□ 0.62
HDDC2-210ENST00000609574 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
HDDC2-210ENST00000609574 GNASQ5JWF2 1037 aa18.9■□□□□ 0.62
HDDC2-210ENST00000609574 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
HDDC2-210ENST00000609574 KIFC2Q96AC6 838 aa18.9■□□□□ 0.62
HDDC2-210ENST00000609574 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
HDDC2-210ENST00000609574 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
HDDC2-210ENST00000609574 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
HDDC2-210ENST00000609574 A0A0U1RQG5 324 aaPredicted RBP18.89■□□□□ 0.61
HDDC2-210ENST00000609574 ATP2A1O14983 1001 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 ASGR1P07306 291 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 SBK1Q52WX2 424 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 GIMAP6Q6P9H5 292 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 PSRC1Q6PGN9 363 aaPredicted RBP18.89■□□□□ 0.61
HDDC2-210ENST00000609574 STK11IPQ8N1F8 1099 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 CHST13Q8NET6 341 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.89■□□□□ 0.61
HDDC2-210ENST00000609574 MSRAQ9UJ68 235 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 FEM1BQ9UK73 627 aa18.89■□□□□ 0.61
HDDC2-210ENST00000609574 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.61
HDDC2-210ENST00000609574 ARVCFO00192 962 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 NDUFB10O96000 172 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 FDX1P10109 184 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 CST5P28325 142 aaPredicted RBP18.88■□□□□ 0.61
HDDC2-210ENST00000609574 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 PPM1EQ8WY54 764 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.88■□□□□ 0.61
HDDC2-210ENST00000609574 LRRCC1Q9C099 1032 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
HDDC2-210ENST00000609574 A0A0G2JMZ2 1700 aa18.88■□□□□ 0.61
HDDC2-210ENST00000609574 DNAJC25-GNG10A0A024R161 153 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 SMIM22K7EJ46 135 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 APPP05067 770 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 GJA9P57773 515 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 RAB30Q15771 203 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 LRRFIP1Q32MZ4 808 aaKnown RBP18.87■□□□□ 0.61
HDDC2-210ENST00000609574 CCDC144BQ3MJ40 725 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 STRBPQ96SI9 672 aaKnown RBP18.87■□□□□ 0.61
HDDC2-210ENST00000609574 RAVER2Q9HCJ3 691 aaKnown RBP18.87■□□□□ 0.61
HDDC2-210ENST00000609574 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 TBX21Q9UL17 535 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
HDDC2-210ENST00000609574 TNFRSF10AO00220 468 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 ZEB2O60315 1214 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 GNAT2P19087 354 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 RASA1P20936 1047 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 TDO2P48775 406 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 CDK7P50613 346 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 OAZ1P54368 228 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 TMEM240Q5SV17 173 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
HDDC2-210ENST00000609574 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDDC2-210ENST00000609574 SYNPO2Q9UMS6 1093 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 COG6Q9Y2V7 657 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 SMCHD1A6NHR9 2005 aa18.86■□□□□ 0.61
HDDC2-210ENST00000609574 CABYRO75952 493 aa18.85■□□□□ 0.61
HDDC2-210ENST00000609574 SLC3A2P08195 630 aaKnown RBP18.85■□□□□ 0.61
HDDC2-210ENST00000609574 CSF2RAP15509 400 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms