RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 HVCN1Q96D96 273 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 RBM17Q96I25 401 aaKnown RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 RNPC3Q96LT9 517 aaKnown RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 TRAPPC9Q96Q05 1148 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 UBA5Q9GZZ9 404 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 VCXQ9H320 206 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 WDR35Q9P2L0 1181 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 A0A087WWV3 80 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 SPTLC2O15270 562 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 PPIP5K2O43314 1243 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 ECEL1O95672 775 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 ZNF18P17022 549 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 DESP17661 470 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 PPP1R7Q15435 360 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 GNPTABQ3T906 1256 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 SH2D4BQ5SQS7 431 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 RBM26Q5T8P6 1007 aaKnown RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 NCAPH2Q6IBW4 605 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 HIBCHQ6NVY1 386 aaPredicted RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 G2E3Q7L622 706 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 RNF168Q8IYW5 571 aaPredicted RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 CAGE1Q8TC20 777 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 TEKT4Q8WW24 435 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 CDC5LQ99459 802 aaKnown RBP8.64□□□□□ -1.03
KDM1A-206ENST00000602503 OSBPL1AQ9BXW6 950 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 ZWILCHQ9H900 591 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 INTS13Q9NVM9 706 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 ITIH6Q6UXX5 1313 aa8.64□□□□□ -1.03
KDM1A-206ENST00000602503 GPR75-ASB3A0A0A6YYF3 556 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 PITPNM1O00562 1244 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 PSMC4P43686 418 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 VAV2P52735 878 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 GOLGA8FQ08AF8 430 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 GOLGA8DPQ0D2H9 430 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 ZNF572Q7Z3I7 529 aaPredicted RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 CADPS2Q86UW7 1296 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 FNBP4Q8N3X1 1017 aaPredicted RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 MREGQ8N565 214 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 TRIML1Q8N9V2 468 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 KCNH5Q8NCM2 988 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 IP6K1Q92551 441 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 LRRC59Q96AG4 307 aaKnown RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 ATP6V1G3Q96LB4 118 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 ZNF570Q96NI8 536 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 TMCO1Q9UM00 188 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 ASB3Q9Y575 518 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 NEDD4P46934 1319 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 MST1RQ04912 1400 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SLIT3O75094 1523 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SRCAPQ6ZRS2 3230 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 WDR17Q8IZU2 1322 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SEMA3EO15041 775 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 MFAP3LO75121 409 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 KIF4AO95239 1232 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 GSTA2P09210 222 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 ENOX2Q16206 610 aaKnown RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 DZIP3Q86Y13 1208 aaKnown RBP8.63□□□□□ -1.03
KDM1A-206ENST00000602503 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 CCT6BQ92526 530 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SEC16BQ96JE7 1060 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 SLX1AQ9BQ83 275 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 VCX3BQ9H321 246 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 VCX3AQ9NNX9 186 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 PHF24Q9UPV7 400 aa8.63□□□□□ -1.03
KDM1A-206ENST00000602503 FAM237AA0A1B0GTK4 181 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 OATP04181 439 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 SYKP43405 635 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 PAK2Q13177 524 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ZMYM1Q5SVZ6 1142 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 SLC4A10Q6U841 1118 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ARHGAP18Q8N392 663 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ARL8AQ96BM9 186 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 DNAAF2Q9NVR5 837 aaKnown RBP8.62□□□□□ -1.03
KDM1A-206ENST00000602503 SUN2Q9UH99 717 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 WDR37Q9Y2I8 494 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 MAP3K15Q6ZN16 1313 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 RBM47A0AV96 593 aaKnown RBP8.62□□□□□ -1.03
KDM1A-206ENST00000602503 IFIT3O14879 490 aaKnown RBP8.62□□□□□ -1.03
KDM1A-206ENST00000602503 TRAPPC3O43617 180 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 JAK2O60674 1132 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 E2F6O75461 281 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ALDH1L1O75891 902 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 PAEPP09466 180 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ERCC5P28715 1186 aaPredicted RBP8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 GUCY1A3Q02108 690 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 LRIG3Q6UXM1 1119 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 Q6ZUG5 572 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 ANKRD24Q8TF21 1146 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 DYDC1Q8WWB3 177 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 AGAP3Q96P47 875 aa8.62□□□□□ -1.03
KDM1A-206ENST00000602503 MMS19Q96T76 1030 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms