RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SLC17A8Q8NDX2 589 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 PDLIM7Q9NR12 457 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 SYNPO2Q9UMS6 1093 aa21.48■■□□□ 1.03
CHMP2A-208ENST00000601220 TRIM43BA6NCK2 446 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 PGK1P00558 417 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 APPP05067 770 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 ZMYM1Q5SVZ6 1142 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 MAMDC4Q6UXC1 1216 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 MSL3Q8N5Y2 521 aaKnown RBP21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 GMCL1P1Q8NEA9 526 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 NEDD1Q8NHV4 660 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 TRIM43Q96BQ3 446 aaPredicted RBP21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 SLC38A10Q9HBR0 1119 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 PRKAG2Q9UGJ0 569 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 STXBP5LQ9Y2K9 1186 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 PLIN4Q96Q06 1357 aa21.47■■□□□ 1.03
CHMP2A-208ENST00000601220 FOXP2O15409 715 aa21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 ADAMTS4O75173 837 aa21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 FAM109BQ6ICB4 259 aaPredicted RBP21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 LENG1Q96BZ8 264 aaPredicted RBP21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 FGD4Q96M96 766 aa21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 ZNF287Q9HBT7 754 aa21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 SALL3Q9BXA9 1300 aa21.46■■□□□ 1.03
CHMP2A-208ENST00000601220 ZNFX1Q9P2E3 1918 aaKnown RBP21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 ERC2O15083 957 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 TTLL1O95922 423 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 AKR1A1P14550 325 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 ITGB8P26012 769 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 TLE2Q04725 743 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 LRRFIP1Q32MZ4 808 aaKnown RBP21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 BADQ92934 168 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 RAVER2Q9HCJ3 691 aaKnown RBP21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 FEM1BQ9UK73 627 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 SYNGAP1Q96PV0 1343 aa21.45■■□□□ 1.02
CHMP2A-208ENST00000601220 LTBP2Q14767 1821 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 ZBED4O75132 1171 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 SHHQ15465 462 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 C9orf50Q5SZB4 431 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 CCSAPQ6IQ19 270 aaPredicted RBP21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 ZNF467Q7Z7K2 595 aaPredicted RBP21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 RNF180Q86T96 592 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 CPXCR1Q8N123 301 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 LRRC47Q8N1G4 583 aaKnown RBP21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 KLHDC9Q8NEP7 349 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 KIFC2Q96AC6 838 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 PRDM5Q9NQX1 630 aaPredicted RBP21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 CNPY2Q9Y2B0 182 aa21.44■■□□□ 1.02
CHMP2A-208ENST00000601220 PPARAQ07869 468 aa21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 NACAP1Q9BZK3 213 aa21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
CHMP2A-208ENST00000601220 A0A1W2PQ45 241 aaPredicted RBP21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 A0A1W2PQY0 241 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 BMP3P12645 472 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 MX1P20591 662 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 OAZ1P54368 228 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 TFAP4Q01664 338 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 PDE4BQ07343 736 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 GUCD1Q96NT3 240 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 TSEN34Q9BSV6 310 aaKnown RBP21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
CHMP2A-208ENST00000601220 SYNRGQ9UMZ2 1314 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 ADCY6O43306 1168 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 TSPY3P0CV98 308 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 TSPY8P0CW00 308 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 CHST13Q8NET6 341 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 NAPBQ9H115 298 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 INCENPQ9NQS7 918 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 IL17RBQ9NRM6 502 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 FAM184BQ9ULE4 1060 aa21.41■■□□□ 1.02
CHMP2A-208ENST00000601220 ZNF536O15090 1300 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 TMEM232C9JQI7 657 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 KIAA0355O15063 1070 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 SLC4A3P48751 1232 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 ACLYP53396 1101 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 IRX5P78411 483 aaPredicted RBP21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 CCDC129Q6ZRS4 1044 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 GMCL1Q96IK5 515 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 KATNBL1Q9H079 304 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 FBXO40Q9UH90 709 aa21.4■■□□□ 1.02
CHMP2A-208ENST00000601220 PLXNA1Q9UIW2 1896 aa21.39■■□□□ 1.02
CHMP2A-208ENST00000601220 MYADML2A6NDP7 307 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 DLL1O00548 723 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 DUSP11O75319 330 aaKnown RBP21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 CLTBP09497 229 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 NOVP48745 357 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 EPHB4P54760 987 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 ACVR2BQ13705 512 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 ANKRD33Q7Z3H0 272 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 TOX2Q96NM4 488 aa21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.39■■□□□ 1.01
CHMP2A-208ENST00000601220 PLA2G6O60733 806 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 SLC3A2P08195 630 aaKnown RBP21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 FDX1P10109 184 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 CST5P28325 142 aaPredicted RBP21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 FAAP100Q0VG06 881 aa21.38■■□□□ 1.01
CHMP2A-208ENST00000601220 KCNA10Q16322 511 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms