RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ACER1Q8TDN7 264 aa20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 MTMR8Q96EF0 704 aa20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 L3MBTL3Q96JM7 780 aaPredicted RBP20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-224ENST00000600718 BMP3P12645 472 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 ECE1P42892 770 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 TYW1BQ6NUM6 668 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 ZNF112Q9UJU3 913 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 SLC16A2P36021 539 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 ME1P48163 572 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 TOB1P50616 345 aaPredicted RBP20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 NAPAP54920 295 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 TPRNQ4KMQ1 711 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 ZMYND12Q9H0C1 365 aa20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
SHKBP1-224ENST00000600718 SUPT20HL1Q3ZLR7 823 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 BTNL9Q6UXG8 535 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 ZBTB5O15062 677 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 GNA11P29992 359 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 PTPAQ15257 358 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 VCPKMTQ9H867 229 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 C6orf50Q9HD87 102 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 PCDHA7Q9UN72 937 aa20.25■□□□□ 0.83
SHKBP1-224ENST00000600718 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 PPP6R2O75170 966 aa20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 DCPSQ96C86 337 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 CEP131Q9UPN4 1083 aa20.24■□□□□ 0.83
SHKBP1-224ENST00000600718 SMCO2A6NFE2 343 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 M0R2N6 131 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 TRAPPC10P48553 1259 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 ZSCAN23Q3MJ62 389 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 EARS2Q5JPH6 523 aaKnown RBP20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 PPP1R18Q6NYC8 613 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 USP50Q70EL3 339 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 A0A1W2PQ27 194 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 A0A1W2PQ64 194 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 A0A1W2PQD8 194 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 TMEM232C9JQI7 657 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 PRAMEF18Q5VWM3 479 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 FAM43AQ8N2R8 423 aa20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.23■□□□□ 0.83
SHKBP1-224ENST00000600718 TRIM75PA6NK02 468 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 SYDE2Q5VT97 1194 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 SPICE1Q8N0Z3 855 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 PCDHA6Q9UN73 950 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 PCDHA8Q9Y5H6 950 aa20.22■□□□□ 0.83
SHKBP1-224ENST00000600718 FAM205CA6NFA0 338 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 LIG1P18858 919 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 INPP5BP32019 993 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 KIAA1755Q5JYT7 1200 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 PIK3AP1Q6ZUJ8 805 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 CCAR1Q8IX12 1150 aaKnown RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 COA7Q96BR5 231 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 MORC2Q9Y6X9 1032 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 ADAMTS3O15072 1205 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 PLA2G6O60733 806 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 LETM1O95202 739 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 BMP15O95972 392 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 ZNF445P59923 1031 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 ZC3H15Q8WU90 426 aaKnown RBP20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 CHURC1Q8WUH1 139 aa20.21■□□□□ 0.83
SHKBP1-224ENST00000600718 CCDC194A0A1B0GVG4 234 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 EPHX2P34913 555 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 CDC37Q16543 378 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 FEZ1Q99689 392 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 GLIS2Q9BZE0 524 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 KIAA1683Q9H0B3 1180 aa20.2■□□□□ 0.82
SHKBP1-224ENST00000600718 MARCKSP29966 332 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 STAT2P52630 851 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 KRT25Q7Z3Z0 450 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 CCDC84Q86UT8 332 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 PICK1Q9NRD5 415 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 DDX19AQ9NUU7 478 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 ADCY7P51828 1080 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 TTC38Q5R3I4 469 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 CCDC73Q6ZRK6 1079 aa20.19■□□□□ 0.82
SHKBP1-224ENST00000600718 FAM160B2Q86V87 743 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms